Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1152 a.a., ATP-dependent DNA helicase, UvrD/REP family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 72.0 bits (175), Expect = 3e-16
 Identities = 129/509 (25%), Positives = 201/509 (39%), Gaps = 81/509 (15%)

Query: 355 LLTQLSAALDNDEQGLLGE--RIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG--L 410
           LL Q++  + + E G+     R+ T     ++DEFQDT   Q++    L ++    G  L
Sbjct: 347 LLPQMARRVLDGEYGVSEAFCRMGTRLAHILVDEFQDTSKDQWAAIQPLAVECLSRGGSL 406

Query: 411 LMIGDPKQAIYAFRGAD--IFTYIKARNQVNA------HYTLGTNWRSSAAMVAAVNQVF 462
             +GD KQAIY +RG D  +F  +    ++ A        TL  NWRS   +V   N VF
Sbjct: 407 TWVGDVKQAIYGWRGGDSALFDAVLRDGELLAIAGDGISGTLPRNWRSRPEIVHFNNDVF 466

Query: 463 S--------SATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQS 514
           +        +A    +  +  P  P   S   D+   +  G  Q       P   D+ Q 
Sbjct: 467 ALLGDEAHATAVLRAMLPEGTP--PDVFSEAVDELARAFTGAAQETP----PRGDDETQE 520

Query: 515 K-----TDYYAQMAEACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVR 569
           +     T   A  +E   A+++  L +   G     R       D+AVLVRT  EA  V 
Sbjct: 521 EGFVRLTHVAAFDSEELDAEVKTALRSLFMGDLALRR----RWRDVAVLVRTNGEAGRVA 576

Query: 570 DALSQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASEL 629
             L +  I  V  ++        ++Q +  L    +  +D      A    L    A+ L
Sbjct: 577 TWLMEWDIPVVTENSLRLADHPLISQTVALLGFLDYPRDDLAFWEFAAGPELLG-DAAGL 635

Query: 630 DALNNDE-------------------NEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQRH 670
           DA   D+                     W + IA F     L S   V   +R V T+  
Sbjct: 636 DAPAMDDWLAEGGRGPLFTRFRDAFPAVWRRWIAPFYSRAGLMS---VYDTVREVYTRFR 692

Query: 671 IAERWLAESEGERWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSDEQI 730
           + +R+  ++   R   + +H +E            QGL+   T    D  +  GG DE++
Sbjct: 693 VFDRYPEDAGFLRRFLEVVHAAE-----------GQGLVSLST--FLDFWKRTGG-DEKV 738

Query: 731 QRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDAESATTWVD-LTGNEE 789
              E     V+++T+HK+KGLE+P+V +PF   + ++              +D L     
Sbjct: 739 PMPEG-MDAVRVMTMHKAKGLEFPVVVIPF---HHQADRADDTPVRMEVEGLDLLVPRCP 794

Query: 790 ALAKADQERLA----EDLRLLYVALTRAV 814
            + K   E  A    E L +LYVA TR V
Sbjct: 795 EMGKPYYEAFAASVREQLHVLYVAWTRPV 823



 Score = 47.0 bits (110), Expect = 9e-09
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 15/77 (19%)

Query: 25 IEASAGTGKTYTIAGLYLRLV--------LGHGC---AETRHAHPLSVDQILVVTFTEAA 73
          I+ASAG+GKTYT+   +L L+         G  C   A+ RH  P    +IL  TFT  A
Sbjct: 10 IKASAGSGKTYTLTRRFLELLGTAQQDGSTGPACTLSADGRHCWP----EILAATFTNRA 65

Query: 74 TAELRDRIRRRLHDARL 90
            E+++R+ RRL +  L
Sbjct: 66 ATEMKERVVRRLKEMAL 82