Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1273 a.a., exodeoxyribonuclease V beta subunit from Paraburkholderia graminis OAS925

 Score =  684 bits (1766), Expect = 0.0
 Identities = 473/1266 (37%), Positives = 665/1266 (52%), Gaps = 103/1266 (8%)

Query: 11   TLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFT 70
            TLD L FPL G  LIEASAGTGKT+TIA LY+RLVLGHG +  R A PL+  +ILVVTFT
Sbjct: 16   TLDPLCFPLSGRSLIEASAGTGKTFTIAMLYVRLVLGHGVSNER-ARPLTPPEILVVTFT 74

Query: 71   EAATAELRDRIRRRLHDARLAF--------ARGASDDPLLRSLLAEFTDHNLA--VSLLL 120
            +AAT ELRDRIR RL +A   F        + G  +  LL +L   ++    A     L 
Sbjct: 75   DAATKELRDRIRARLTEAAAYFQAAPAGVTSLGPGETDLLHALRDAYSQQQWAGCARRLQ 134

Query: 121  SAERQMDEAAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYWRRQFYPL 180
             A   MDEAA+ TIHG+C R+L ++AF+S S F     TD+S L A+VV DYWR    PL
Sbjct: 135  LAAEWMDEAAVSTIHGWCNRILREHAFDSDSLFTQTLETDQSNLLAEVVRDYWRTFMTPL 194

Query: 181  PISLASEVRRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGDLAALQQAQIARICEIKQHW 240
              + A+ V      P  L  ++   +   P  +        L A ++    R+  IK  W
Sbjct: 195  DAADAATVAEWVRGPLDLQKKLRNLIDVAPQLVDASAPADALQAAREEFARRLAAIKAPW 254

Query: 241  ----LVEREEIEPAVTGSDLHKNSQNALLRR-LPILDAWAQS--ETHDLHVPSELEEFTQ 293
                L  +  ++ A     L +    A   R L  L  WA    +T      +  +  T 
Sbjct: 255  KTLPLQIKAVLDVARADGQLGREFAQATCDRWLKELAGWADDPLKTKPNLTDTAWDRLTH 314

Query: 294  SGLLAKSKKGNPPQLALFERIEAFLAEPVSL---KTPLLVHAIHHCRHWLAKAKSTHHWL 350
              L    + G PP    F+ +     E  +L   +  LL HA        +  +     +
Sbjct: 315  EALARHCQHGTPPSHPGFDELAKLRGEIAALPDARDDLLSHAARWVAERFSLEQGRRAQM 374

Query: 351  SFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYL------- 403
             FDDLLT+L AAL       L + +R  +PVA+IDEFQDTDP+QY IF  +Y        
Sbjct: 375  GFDDLLTRLDAALHGPNGERLADIVRKQFPVALIDEFQDTDPIQYRIFDAVYRPANDGAN 434

Query: 404  ----DYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAH-YTLGTNWRSSAAMVAAV 458
                   +  L++IGDPKQAIYAFRGADI+TY+ AR    A  YTL TN+RS+ AMV A 
Sbjct: 435  VEAESEAKNALILIGDPKQAIYAFRGADIYTYLAARRSCGAQLYTLATNFRSTHAMVNAT 494

Query: 459  NQVFSSATH------PFIY----SDDIPFQPVAASPGADKRHWSLEGQVQPALTYWW-PE 507
            N  F+ A         F++     + +PF  V A    D   + ++ +   ALT WW P 
Sbjct: 495  NHCFNVAEQRDEGEGAFLFRTSDGNPVPFIQVGAKGRDDA--FVVDSETPRALTAWWLPA 552

Query: 508  DLD-KPQSKTDYYAQMAEACAAQIQHILTASASGAATFH------RGEAIEAGDLAVLVR 560
              D KP +K+ Y  +MAE+CA ++  +L     G+A F       R  ++   D+AVLV 
Sbjct: 553  SSDGKPLAKSTYIDRMAESCATEMVRLLDLGRRGSAGFAGAGDAGRLRSLRPADMAVLVN 612

Query: 561  TGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERLLLAVWQPEDERLLRAAVASN 620
               EA  +R ALS++ + +VYLS++DSVF S  A +++  L+A   P+D RL+RAA+A+ 
Sbjct: 613  NRIEAGAIRKALSKRDVRTVYLSDKDSVFESPQAAEMQHWLVACADPDDGRLVRAALATA 672

Query: 621  LFALTASELDALNNDENEWEQLIAEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLA--- 677
               L  ++LDAL ++   WE  + +FR YR  W   GVLPMLR ++    +  R L    
Sbjct: 673  TLGLGWAQLDALYSNGMAWETCVLQFRGYRECWRRLGVLPMLRRLMNDFSVPARLLGLHA 732

Query: 678  -----ESEGERWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAAQGLGGSDEQIQR 732
                    GER +TD LH++ELLQQA+  I+ + GL+R+L +    AA G GG D +  R
Sbjct: 733  HDTQGVQGGERTMTDLLHLAELLQQASPMIEGEHGLIRYLVEQREAAADGNGGGDARQIR 792

Query: 733  LESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEG----KYYDAESATTWVDLTGNE 788
            LES+  LV++VTIHKSKGLEYPLVFLPFV ++R +       K++DA+  T  V LT   
Sbjct: 793  LESDGDLVKVVTIHKSKGLEYPLVFLPFVCAHRPADPKDVPFKWHDAQG-TLQVSLTDTG 851

Query: 789  EALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHRSAMGFLLQDG 848
              L K D+ERL EDLR LYVALTRA Y  +IG+A L+            RSA+G+LL  G
Sbjct: 852  GVLQKVDRERLGEDLRKLYVALTRARYATWIGMAELKE---------FERSAIGYLLNGG 902

Query: 849  QEGGIADLQQALLKQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQAIDRRWRV 908
            +     DL + L +      D+   P P+  ++         ++  A E  + +   W V
Sbjct: 903  KMLAAGDLVRCLEEVLGASTDIAVTPAPEPGDEKLARQDQVSQQGKAHESVRVMREPWSV 962

Query: 909  TSYSGLVMQSSHAR--HDPLQELPLLEVGGFDLD--------SAQERDGAALESVERSIF 958
             SYS L   S  AR   D  +E   +E    +++        SAQ     A +   R++ 
Sbjct: 963  ESYSSLKKLSHGARVAPDTSREEEFIEERDAEVEIEEDDTALSAQPLRRVATQLAARALH 1022

Query: 959  NFPRGARPGTFLHSLFE---EVDFQQSAHSEPNTKIILELMESEQIESEWLPVLQQLVDT 1015
            +FPRG+  G+FLH L E   +  F+Q A      + ++    S +    W+  L Q +  
Sbjct: 1023 DFPRGSDEGSFLHDLLEWAAQHGFRQVAADIGPLREVIARRCSVRGWERWIDPLTQWIVQ 1082

Query: 1016 VLSTPLDGKA--------LRLQQIMAAQRLTELEFLLPIEVLDAPTLNRITQRHDPLSAH 1067
            +++TPL  KA        + L ++  +  + E+EF L    +D   ++R+   +     H
Sbjct: 1083 IVTTPLTLKAAHGVEATSITLSELRTS--IGEMEFWLAAHRVDTAAVDRLVSEYTV--GH 1138

Query: 1068 AGDLGFHAVQ--GMLKGFIDLVFQYQGRYYVLDWKSNHLGDDPAAYHPQRLGSAMAEHRY 1125
            AG       Q  GMLKGF+DLVF+++GRYYV D+KSN LG   AAY  +R+ + +   RY
Sbjct: 1139 AGRTAIEPAQLNGMLKGFMDLVFEHEGRYYVADYKSNWLGSGDAAYTAERIRAQILRSRY 1198

Query: 1126 DLQYQIYALALHRFLRSRLAHYNYEQHFGGVFYLFLRGMDGRGDQGVFHTKPSLALLDEL 1185
            DLQY +Y LALHR L++R   Y+Y+ H GG  YLFLRG++    QG++  +P   L++ L
Sbjct: 1199 DLQYVLYLLALHRLLKARQPGYDYDTHIGGAVYLFLRGLNA-STQGIYAERPPRELIERL 1257

Query: 1186 DGLIAG 1191
            D L  G
Sbjct: 1258 DALFTG 1263