Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., ATP-dependent DNA helicase Rep from Paraburkholderia bryophila 376MFSha3.1

 Score = 65.9 bits (159), Expect = 1e-14
 Identities = 115/515 (22%), Positives = 195/515 (37%), Gaps = 116/515 (22%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           + FDDL+   +    ++EQ  + +R +      +IDE+QDT+  QY +  +L    P+  
Sbjct: 192 VDFDDLIRLPAELFASNEQ--VRDRWQNKLRYLLIDEYQDTNACQYELLKQLA--GPRAA 247

Query: 410 LLMIGDPKQAIYAFRGADIFTYIK-ARNQVNAH-YTLGTNWRSSAAMVAAVNQVFSSATH 467
              +GD  QAIY +RGA +    +  ++    H   L  N+RS+  ++ A N V   A +
Sbjct: 248 FTAVGDDDQAIYGWRGATLENLAQLGKDFPKLHVIKLEQNYRSTVRILTAANNVI--ANN 305

Query: 468 PFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACA 527
           P ++               +K+ WS  G                P +  ++ A+      
Sbjct: 306 PKLF---------------EKKLWSEHGMGDSITV--------TPCNDEEHEAE------ 336

Query: 528 AQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDS 587
           + +  +        A F         D A+L R   +AR+    L ++ I  V LS   S
Sbjct: 337 SVVFRLSAHKFERRANFR--------DYAILYRGNFQARIFEQVLRRERIPYV-LSGGQS 387

Query: 588 VFASDVAQDIERLLLAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLIAE-- 645
            F     +DI   L  +    D+     A+ +    +  + L+AL +   + +  + E  
Sbjct: 388 FFDKAEIKDICAYLRLIANANDDPAFIRAITTPRRGVGNTTLEALGSFAGQAKVSLFEAV 447

Query: 646 -FRQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERW--LTDYLHISELLQQATREI 702
                    S R + PM       + + +R   ++ G     L D +H    L  A  E 
Sbjct: 448 YMGGIEARLSPRQIEPMRVFCDFMQRLTDRAEKDAAGTLLDELMDAIHYEAYLYDAFDER 507

Query: 703 DSD---QGLLRFL-------TQAMA-----------------DAAQGLGGSDEQIQRL-- 733
            +    Q +L F+       T+A                   D A G G + + +  L  
Sbjct: 508 QAQSKWQNVLEFIEWLKRKGTKAEPQGSDESAGSGNQEATGYDTADGFGDTGKNLLGLIQ 567

Query: 734 -----------ESERRLVQIVTIHKSKGLEYPLVFL----PFVMSYRESSEGKYYDAESA 778
                      E +   V++ T+H SKGLEYP VFL      +M +R  ++ +       
Sbjct: 568 TVALMSMLEGREEDPDAVRLSTVHASKGLEYPHVFLVGVEEGIMPHRGGADDE------- 620

Query: 779 TTWVDLTGNEEALAKADQERLAEDLRLLYVALTRA 813
                           D  R+ E+ RL+YVA+TRA
Sbjct: 621 --------------PIDDARIEEERRLMYVAITRA 641



 Score = 39.3 bits (90), Expect = 1e-06
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 10/101 (9%)

Query: 19  LHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLSVDQILVVTFTEAATAELR 78
           L G  L+ A AG+GKT  I      L+   G  E RH        I  VTFT  A AE+R
Sbjct: 16  LDGPCLVLAGAGSGKTRVITQKIAHLIEAKG-FEPRH--------IAAVTFTNKAAAEMR 66

Query: 79  DRIRRRLHDARLAFARGASDDPLLRSLLAEFTDHNLAVSLL 119
           +R+ + L    L    G     +  + L   T H+L V +L
Sbjct: 67  ERVGKLLEGKTLT-TPGKEGRKVPVNQLTVCTFHSLGVQIL 106