Pairwise Alignments

Query, 1208 a.a., exodeoxyribonuclease V subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., ATP-dependent DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 58.9 bits (141), Expect = 2e-12
 Identities = 113/512 (22%), Positives = 194/512 (37%), Gaps = 111/512 (21%)

Query: 350 LSFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCG 409
           + FDDLL   +  L  D   +L  R R  +   ++DE+QDT+  Q+SI  +L  +  +  
Sbjct: 193 MDFDDLLVY-TYILFRDFPEVLA-RYREQFRYVLVDEYQDTNYAQHSIVLQLTKENQR-- 248

Query: 410 LLMIGDPKQAIYAFRGADI-----FTYIKARNQVNAHYTLGTNWRSSAAMVAAVNQVFSS 464
           + ++GD  Q+IY+FRGADI     FT +    +V   + L  N+RS+  +V A N +   
Sbjct: 249 VCVVGDDAQSIYSFRGADIDNILYFTKVYPNTKV---FKLEQNYRSTQTIVCAANSLI-- 303

Query: 465 ATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAE 524
                                 +K    +  +V      +  ++  +P      Y+ + E
Sbjct: 304 ----------------------EKNERQIRKEV------FSEKERGEPIGVFQAYSDVEE 335

Query: 525 ACAAQIQHILTASASGAATFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSN 584
                        A+  A   R  +    D A+L RT  ++R+  +AL ++ +       
Sbjct: 336 G---------DIVANKIAELRREHSYGYADFAILYRTNAQSRVFEEALRKRSMPYKIYGG 386

Query: 585 RDSVFASDVAQDIERLLLAVWQPEDERLLRAAV---ASNLFALTASEL--DALNNDENEW 639
             S +     +D+      V  P DE   +  +   A  +   T  ++   A  N  + W
Sbjct: 387 L-SFYQRKEIKDVIAYFRLVVNPNDEEAFKRIINYPARGIGDTTVGKIISAATENGVSLW 445

Query: 640 EQLIAEFRQYRRLWSERGVLPMLRAVLTQRHIAERWLAESEGERWL---TDYLH----IS 692
             L         +   +G    L+     R + E ++ +   +      TD +     I+
Sbjct: 446 AALCEPLSYGLNI--NKGTHTKLQGF---RELIEGFMTDQVDKSAYEIGTDIIRRSGIIN 500

Query: 693 ELLQQATREIDSDQGLLRFLTQAMAD---AAQGLGGSDEQIQRLESERRL---------- 739
           ++ Q  + E  S +  +  L   M D     Q  G  +  +    SE  L          
Sbjct: 501 DVCQDTSPENLSRKENIEELVNGMNDFCALRQEEGNPNISLTDFLSEIALLTDQDSDKAD 560

Query: 740 ----VQIVTIHKSKGLEYPLVFLPFVMSYRES--SEGKYYDAESATTWVDLTGNEEALAK 793
               + ++T+H +KGLE+  V   FV+   E+    G   D+  A               
Sbjct: 561 DGEKITLMTVHSAKGLEFKNV---FVVGLEENLFPSGMVGDSPRA--------------- 602

Query: 794 ADQERLAEDLRLLYVALTRAVYGCFIGIAPLR 825
                L E+ RL YVA+TRA   C+I  A  R
Sbjct: 603 -----LEEERRLFYVAITRAEEHCYISFAKTR 629