Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (428), Expect = 2e-46
 Identities = 137/385 (35%), Positives = 189/385 (49%), Gaps = 84/385 (21%)

Query: 11  RLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSA-ELGRGHICLPLCDA 69
           R + +G LR LD  F  F+ + A        + + L +L+AAL++ +LG GH+CL + + 
Sbjct: 36  RWVERGWLRALDKAFVAFLHELA-------PDDDPLVLLAAALTSHQLGHGHVCLDVFET 88

Query: 70  QGNRCDLAALIGLYGEASLQHSERWL---------AVDWQALLQASPLVGQQGEAVPLMF 120
                D A  + L  E  LQ     L          V W   L +S LV        L  
Sbjct: 89  L-KEPDFA--LSLPPEGDLQTGAMLLPSQILATLDGVRWCKALASSRLVA-------LAV 138

Query: 121 DGSRLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLG----LWQA 176
           DGS                      A QR  P  L+  R     L+ R Y G    + +A
Sbjct: 139 DGSE--------------------EAQQR--PLVLSGKR-----LYLRRYWGYERRIDEA 171

Query: 177 LQQKPLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNW 236
           L+Q+ +        L +RLD +   A     I+                          W
Sbjct: 172 LRQRLIEHEAAPSDLRERLDGLFGPANPSGPID--------------------------W 205

Query: 237 QKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAAR 296
           QK+A A+A    F++++GGPGTGKTTTV +LLA L + ++  GK   I+L APTGKAAAR
Sbjct: 206 QKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGKPLRIRLAAPTGKAAAR 265

Query: 297 LTESMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEA 356
           LTES+ + V  L ++  +   IP   +T+HRLLG+ PG+  FRHH  N L LD+LVVDEA
Sbjct: 266 LTESISQQVRTLDVDEAVRERIPCDVTTVHRLLGSRPGTRHFRHHAGNRLPLDVLVVDEA 325

Query: 357 SMVDLPLMVKLVEALPKHARLILLG 381
           SM+DL +M  L++ALP HARL+LLG
Sbjct: 326 SMIDLEMMANLLDALPVHARLVLLG 350