Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., exodeoxyribonuclease V, alpha subunit from Pseudomonas stutzeri RCH2

 Score =  375 bits (962), Expect = e-108
 Identities = 259/658 (39%), Positives = 347/658 (52%), Gaps = 103/658 (15%)

Query: 48  VLSAALSAE-LGRGHICLPLCDAQGNRCDLAALIGLYGEASLQHSERWLAVDWQALLQAS 106
           +L+AAL  E L  G +CLPL    G R        L   A+           W+A L AS
Sbjct: 31  LLAAALCCEALADGDVCLPLGRLAGKRPWPDQDFSLPPLAT-----------WRAQLDAS 79

Query: 107 PLVGQQGEAVPLMFDGSRLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLF 166
            L+G  G+  PL+  G RLY                                        
Sbjct: 80  ELIGAPGDYAPLILSGERLY---------------------------------------- 99

Query: 167 ARDYLGLWQALQQKPLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQ 226
               L  +QA +Q+        QLL    D  + D           + +   A L A  Q
Sbjct: 100 ----LARYQAYEQQLAE-----QLLTRAADAPDVDE---------AQLSDSLARLFAFNQ 141

Query: 227 LIPLTHCLNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKL 286
             P     +WQ++AAA A+ RR AVISGGPGTGKTTTV +LLAAL+ Q    G+   I L
Sbjct: 142 QSP-----DWQRLAAAQAVRRRLAVISGGPGTGKTTTVVRLLAALLEQP--GGERLAIGL 194

Query: 287 IAPTGKAAARLTESMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPL 346
            APTGKAAAR+ E++  A ++L +   +  A+P  + T+HRLLG+   S   RH   NPL
Sbjct: 195 AAPTGKAAARMAEAIRNAKAELPVSDAVKDALPDEARTLHRLLGSRGDSPRVRHDAANPL 254

Query: 347 HLDLLVVDEASMVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGY 406
            LD+LVVDEASMVDL LM KLV ALP  ARLILLGDKDQLA+VEAGAV  ++C    +G+
Sbjct: 255 ALDVLVVDEASMVDLALMAKLVAALPPKARLILLGDKDQLAAVEAGAVFAELCE--GRGF 312

Query: 407 GHEQGAQLAELTGFATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPA 466
             ++ A L  +TG     +T     + + D + +L  S+RF   SGIG+LA+ IN G   
Sbjct: 313 DSQEAADLQRITGQNVPVETPR---SRLGDAVVLLTHSHRFAGDSGIGELARRINGGDAK 369

Query: 467 RVEAVWQQSFSDIEHFALSGEHYQQLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAK 526
              A+ Q+   D+   A        L++ L Q Y PYL  + Q                 
Sbjct: 370 GTVALLQEGRPDLAWNAAPSP--AALIERLEQGYAPYLQAVRQAD-------------PS 414

Query: 527 SALDAFSRCRLLCALREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHG 586
           +A +AF+  R L A REG FGV G+N  +E        +  +E  WY GR +MV +ND+ 
Sbjct: 415 AAFEAFNGFRALTAQREGAFGVTGINEALEARFKRRLGVPARER-WYPGRAVMVRQNDYA 473

Query: 587 LGLYNGDIGLCMRDRDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEF 646
           LGL+NGDIGLC+R    +QG L+V+FE  DG  +   P+R+P H++A+AMT+HKSQGSEF
Sbjct: 474 LGLFNGDIGLCLR---TEQG-LRVFFEGDDG-YRGFAPARLPSHDSAFAMTVHKSQGSEF 528

Query: 647 DLTLLILPPDYSPILTRELVYTGITRAKKQLKLYCDNKVLQRAIKVKTQRASGLVARL 704
              LL LP   SP+LTR L YTGITRAK++++++     L  A+  + +RA+GL  RL
Sbjct: 529 AEVLLALPEQPSPLLTRSLFYTGITRAKRKVEIWALPARLAEAVNTRAERAAGLAERL 586