Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 51.6 bits (122), Expect = 7e-11
 Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 25/161 (15%)

Query: 543 EGDFGVMGLN-TRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGD-------- 593
           E D  ++G N TR        +L     E    G  ++  RND   GL NG         
Sbjct: 249 EADQVLVGTNRTRRRYNQRLRELKGFTSEYPQSGDKLVCLRNDPAKGLLNGSLWQVMSSS 308

Query: 594 -------IGLCMRDRDDDQGR-------LKVYFELPDGSIKAVLPSRVPQHETAYAMTIH 639
                  I L +R  DDD  R       LK  FE  +G I      R  + +  YA+T+H
Sbjct: 309 KETVKPGINLMIRPEDDDMDRGAAKIKLLKAAFEDVEGEIPWSTRKRYDEFDYGYALTVH 368

Query: 640 KSQGSEFDLTLLILPPDYSPILTRE-LVYTGITRAKKQLKL 679
           K+QGS+++  +++    ++   TRE  +YT ITRA ++L +
Sbjct: 369 KAQGSQWN-NVVLFDESWAFRDTRERWLYTAITRAAERLTI 408



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 22/143 (15%)

Query: 254 GGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTE---SMGKAVSQLAI 310
           G  GTGKTT         +++  A+    E+   A TGKAA  L     +  K +  L  
Sbjct: 65  GYAGTGKTT---------LARHFAENVDGEVVFAAFTGKAAQVLRSKGATNAKTIHSLIY 115

Query: 311 EPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPL-HLDLLVVDEASMVDLPLMVKLVE 369
            P     +    +      G    +  F  + ++P+    L++VDE SMVD  L   L+ 
Sbjct: 116 RPRGEEEVEDEET------GKTSIAPMFAINRQSPVAKAALIIVDECSMVDEALGKDLMS 169

Query: 370 ALPKHARLILLGDKDQLASVEAG 392
                  +++LGD  QL  V  G
Sbjct: 170 F---GTPILVLGDPGQLPPVSGG 189