Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., Probable exonuclease V (alpha chain) RecD (exodeoxyribonuclease V alpha chain) (exodeoxyribonuclease V polypeptide) from Mycobacterium tuberculosis H37Rv

 Score =  241 bits (616), Expect = 5e-68
 Identities = 184/492 (37%), Positives = 264/492 (53%), Gaps = 55/492 (11%)

Query: 215 AQRAADLQALEQLIPLTHCLNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQ 274
           ++R A +  L +L P     + Q+ AA +AL++   V++GGPGTGKTTTV +LLA +  Q
Sbjct: 133 SRRPAGVPDLRRLFPTG--FDEQRRAAEIALSQGVTVLTGGPGTGKTTTVARLLALVAEQ 190

Query: 275 SMAQGKV-PEIKLIAPTGKAAARLTESMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIP 333
           +   G+  P I L APTGKAAARL E++ + +++L      A      + T+HRLLGA P
Sbjct: 191 AELAGEPRPRIALAAPTGKAAARLAEAVRREMAKLDATDR-ARLGDLHAVTLHRLLGAKP 249

Query: 334 GSAEFRHHTRNPLHLDLLVVDEASMVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGA 393
           G A FR   +N L  +++VVDE SMV L LM +L EA+   ARLIL+GD DQLASVEAGA
Sbjct: 250 G-ARFRQDRQNRLPHNVIVVDETSMVSLTLMARLAEAVRPGARLILVGDADQLASVEAGA 308

Query: 394 VLGDICTFLNQGYGHEQGAQLAELTGFATLRQTASKTVNPVADCLCMLQKSYRFDARSGI 453
           VL D+      G+     A +A+L                        + S+RF     I
Sbjct: 309 VLADLV----DGFSVRDDALVAQL------------------------RTSHRFG--KVI 338

Query: 454 GQLAKAINSGSPARVEAVWQQSFSDIEHFALSGEHYQQLLQTLVQAYRPYLSLLNQPTEQ 513
           G LA+AI +G    V  + +     IE F    +   +L   LV    P+   L +    
Sbjct: 339 GTLAEAIRAGDGDAVLGLLRSGEERIE-FVDDEDPAPRLRAVLV----PHALRLREA--- 390

Query: 514 FESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMGLNTRIERALNAHKLIKTQEEIWY 573
                 ++L  +  AL      RLLCA R+G  GV+  N R++  L A +  +     WY
Sbjct: 391 ------ALLGASDVALATLDEHRLLCAHRDGPTGVLHWNRRVQAWL-AEETGQPPWTPWY 443

Query: 574 HGRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGRLKVYFELPDGSIKAVLPSRVPQHETA 633
            GRP++VT ND+GL +YNGD G+ +         L+       G +  V   R+   ET 
Sbjct: 444 AGRPLLVTANDYGLRVYNGDTGVVLAGPTG----LRAVISGASGPLD-VATGRLGDVETM 498

Query: 634 YAMTIHKSQGSEFDLTLLILPPDYSPILTRELVYTGITRAKKQLKLYCDNKVLQRAIKVK 693
           +AMTIHKSQGS+ D   +++P + S +LTREL+YT +TRAK+++++      ++ AI  +
Sbjct: 499 HAMTIHKSQGSQVDEVTVLMPQEDSRLLTRELLYTAVTRAKRKVRVVGSEASVRAAIARR 558

Query: 694 TQRASGLVARLE 705
             RASGL  RL+
Sbjct: 559 AVRASGLRMRLQ 570



 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 20/146 (13%)

Query: 21  LDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRGHICLPLCDAQGNRCDLAALI 80
           LDV       +   LAG +    E +++  A     L  G +C+          DL ++ 
Sbjct: 25  LDVSDVHVAQRLCALAGES---DERVALAVAVAVRALRAGSVCV----------DLLSIA 71

Query: 81  GLYGEASLQHSERWLAVDWQALLQASPLVGQQGEAVPLMFDGSRLYLHRYWHYEKQLAAR 140
            + G   L   +     DW A ++ASPL+      V  ++D   LYL RYW  E+Q+ A 
Sbjct: 72  RVAGHDDLPWPD---PADWLAAVRASPLLADP--PVLHLYDDRLLYLDRYWREEEQVCAD 126

Query: 141 LTELAAPQRLSPAELANLRERLNTLF 166
           L  L   +R  PA + +LR    T F
Sbjct: 127 LLALLTSRR--PAGVPDLRRLFPTGF 150