Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., RecBCD enzyme subunit RecD from Enterobacter sp. TBS_079

 Score =  518 bits (1333), Expect = e-151
 Identities = 319/705 (45%), Positives = 411/705 (58%), Gaps = 111/705 (15%)

Query: 7   EVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRGHICLPL 66
           E+    + Q  LR LDVQFA  +          + +   + + +A LS + G GH+CLPL
Sbjct: 5   ELLLEAVEQRLLRHLDVQFAMMV----------SGDEPAVMLAAAILSKDAGEGHVCLPL 54

Query: 67  CDAQGNRCDLAAL---IGLYGEASLQHSERWLAVDWQALLQASPLVGQQGEAVPLMFDGS 123
                +    AAL     L GE+          VDW  +L  SP V       P++  G 
Sbjct: 55  SRLVMDEKMPAALQSCFALLGES----------VDWPTVLHRSPAVSAANSQTPMILTGD 104

Query: 124 RLYLHRYWHYEKQLAARLTELAAPQRLSPAELANLRERLNTLFARDYLGLWQALQQKPLS 183
           RLYL+R W  E  +A   +E  AP    P + A LR+ L+TLF                +
Sbjct: 105 RLYLNRLWRNELAVARFFSETNAP---LPCDEAQLRQTLDTLF----------------T 145

Query: 184 SVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVAAAV 243
           SVE               A DW                               QKVAAAV
Sbjct: 146 SVE---------------ATDW-------------------------------QKVAAAV 159

Query: 244 ALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTESMGK 303
           ALTRR +VISGGPGTGKTTTV KLLAALI  S  Q     I+L APTGKAAARLTES+G 
Sbjct: 160 ALTRRISVISGGPGTGKTTTVAKLLAALIQLSGEQ--KCRIRLAAPTGKAAARLTESLGG 217

Query: 304 AVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMVDLPL 363
           A+ +L +  E  A  P+ +ST+HRLLGA PGS   R+H  NPLHLD+LVVDEASM+DL +
Sbjct: 218 ALQKLPLTGEQLALFPNDASTLHRLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTM 277

Query: 364 MVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQLAELTGFATL 423
           M +L++ALP HAR+I LGD+DQLASVEAGAVLGDICT+ + GY  E+  +L+ LTG  +L
Sbjct: 278 MARLIDALPAHARVIFLGDRDQLASVEAGAVLGDICTYASLGYTAERAEELSRLTG-CSL 336

Query: 424 RQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSGSPARVEAVWQQSFSDIEHFA 483
                     + D LC+LQKSYRF + SGIGQLA A+N G      AV+   F+DIE  +
Sbjct: 337 ASENHSLAGALRDSLCLLQKSYRFGSDSGIGQLASAVNRGDRHTTCAVFDGQFTDIEKKS 396

Query: 484 L-SGEHYQQLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCRLLCALR 542
           L +GE YQ +L   +Q Y+ +L+ + Q     +            AL AF   +LLCALR
Sbjct: 397 LQTGEEYQAMLDDALQGYQHFLTGVQQQCTPAQ------------ALAAFGEYQLLCALR 444

Query: 543 EGDFGVMGLNTRIERAL-NAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRDR 601
           EG FGV GLN R E+ L    K+ +T    WY GRP+M+ RND  LGL+NGDIG+ +   
Sbjct: 445 EGPFGVSGLNDRFEQLLGQKRKINRTPHSRWYEGRPVMIARNDSALGLFNGDIGIAL--- 501

Query: 602 DDDQG-RLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYSPI 660
             D+G  L+V+F++PDGS+K+V PSR+P+HETA+AMT+HKSQGSEF+   LILP   SP+
Sbjct: 502 --DRGLGLRVWFQMPDGSVKSVQPSRLPEHETAWAMTVHKSQGSEFNHAALILPTQLSPV 559

Query: 661 LTRELVYTGITRAKKQLKLYCDNKVLQRAIKVKTQRASGLVARLE 705
           +TREL+YT ITRA+++L LY D +VL +AI  +T+R SGL A  E
Sbjct: 560 ITRELIYTAITRARQRLSLYADERVLLQAIATRTERRSGLSAIFE 604