Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., DNA helicase/exodeoxyribonuclease V, alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 97.1 bits (240), Expect = 3e-24
 Identities = 118/443 (26%), Positives = 170/443 (38%), Gaps = 103/443 (23%)

Query: 240 AAAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTE 299
           A    L    + I+GG GTGKTT +   L A            EI  +A +G+AA RL E
Sbjct: 350 AVTTCLDNSVSCITGGAGTGKTTVLRTALRAYHQLGF------EIHAVALSGRAAMRLHE 403

Query: 300 SMGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDLLVVDEASMV 359
           S+G   S +A     A   P    T H                       LLV+DEASM+
Sbjct: 404 SIGFVTSTIAKLLREAPIEPCVEKTNH-----------------------LLVIDEASMI 440

Query: 360 DLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTFLNQGYGHEQGAQLAELTG 419
           DLP M +LV  +    RLI  GD DQL  +  G VL DI                     
Sbjct: 441 DLPTMYRLVNHIHPSVRLIFTGDPDQLPPIGCGKVLADI--------------------- 479

Query: 420 FATLRQTASKTVNPVADCLCMLQKSYRFDARSGIGQLAKAINSG-SPARVE--AVWQQSF 476
                   +KTV        ML    R +  +GI + +K IN G  P R+   A+     
Sbjct: 480 ------VEAKTV-----ANTMLDIVKRQEGSTGIPEYSKLINQGVMPDRLSTGAIHFHET 528

Query: 477 SDIEHFALSGEHYQQLLQTLVQAYRPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCR 536
           S  +   +  E YQQ          P  S +  PT+   S    +  L + A++  S   
Sbjct: 529 SKTDIAKVCCELYQQC---------PENSRVMAPTKALVS---EINKLTQQAVNPDS--- 573

Query: 537 LLCALREGDFGVMGLNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGL 596
                           T +E  +N  K              ++ T+N +  G+ NG +G+
Sbjct: 574 ----------------TSLEFEINGDKFFLPLR----MNDAVLFTQNHYDKGIQNGSLGM 613

Query: 597 CMRDRDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPD 656
               +       +V   L  G    +  S +   E  YA+T+HK+QGS+F   ++ L   
Sbjct: 614 LTNAKPSGDSYGEV--TLDTGEKVEITQSVLDCMELGYAITLHKAQGSQFPRIIIAL--Q 669

Query: 657 YSPILTRELVYTGITRAKKQLKL 679
              I+ R   YT ITRA+ ++ +
Sbjct: 670 NGRIVDRAWFYTAITRAESEIHI 692