Pairwise Alignments

Query, 706 a.a., exodeoxyribonuclease V subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., exodeoxyribonuclease V, alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  423 bits (1088), Expect = e-122
 Identities = 299/749 (39%), Positives = 401/749 (53%), Gaps = 129/749 (17%)

Query: 6   SEVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLSAALSAELGRGHICLP 65
           +E+ K    +  + PLD  FA  + +       N A+  L  +L A LS +L   H CL 
Sbjct: 29  AELLKYWEKERLITPLDRHFALEMAR----LHPNDAQEPLFMLLCALLSQQLSAQHTCLV 84

Query: 66  LCDAQGNRCDLAALIGLYGEA-SLQHSERWLAV-DWQALLQASPLVGQQGEAVPLMFDGS 123
           L            ++     A S+ H +  L++ +  A LQ    VG+     PL+FDG 
Sbjct: 85  L----------EHIVPANPMAESVNHCQIRLSLPELIARLQNFEAVGEPHSNKPLIFDGG 134

Query: 124 RLYLHRYWHYEKQLAARLTELAAPQRLSPAEL---ANLRERLNTLFARDYLGLWQALQQK 180
           RLYL RY H+E ++A  LT L++ Q  +  +    A LR +L+ LF              
Sbjct: 135 RLYLERYHHFETEVANALTRLSSSQPANSNDKDSDAPLRRQLDYLFPN------------ 182

Query: 181 PLSSVERIQLLNDRLDVVESDALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVA 240
                                                AA   A   L P    ++WQKVA
Sbjct: 183 -------------------------------------AASSHAATTLEPH---IDWQKVA 202

Query: 241 AAVALTRRFAVISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTES 300
            A AL ++ AVI+GGPGTGKTTTVTKLL  L+ Q    G   +I+L+APTGKAAARL+ES
Sbjct: 203 TATALGKKLAVITGGPGTGKTTTVTKLL--LLQQL---GSPKQIRLVAPTGKAAARLSES 257

Query: 301 MGKAVSQLAIEPEIAAA-------------------IPSSSSTIHRLLGAIPGSAEFRHH 341
           +  + ++L  E + A A                   +P  +ST+HRLLG IP SA+FRHH
Sbjct: 258 IKASKARLEQELKQAQATNEQVQSHETQALLAALKQVPEEASTLHRLLGVIPNSAQFRHH 317

Query: 342 TRNPLHLDLLVVDEASMVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICTF 401
             NPL LDLL+VDEASMVDLP+M KL+ ALP+ A LILLGD+DQLASVEAGAVL DIC  
Sbjct: 318 QGNPLRLDLLIVDEASMVDLPMMYKLLTALPEQAGLILLGDQDQLASVEAGAVLADICAG 377

Query: 402 L----------NQGYGHEQGAQLAELTGFATLRQTASKTVNPVADCLCMLQKSYRFDARS 451
           L             Y   Q  QL++LT F  LR    +    + D LCML  S+RF   +
Sbjct: 378 LKYESDQHSEWRMRYSQAQAEQLSKLTSF-DLRAYIHREPK-IGDSLCMLTHSHRFKGDA 435

Query: 452 GIGQLAKAINSGSPARVEAVWQQSFSDIEHFALSGEHYQQLLQTLVQAYRP-----YLSL 506
           GIG LA A+N    A +  VWQ+  +++       EH   L QT  +   P       +L
Sbjct: 436 GIGLLASAVNRSDLAGILTVWQRGLAELTWL----EHSMALSQTQAKISEPANNSGLHAL 491

Query: 507 LNQPTEQF-------ESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMGLNTRIERAL 559
           L Q  EQ+       + +  S +  A  A+  F++ R+LCA+R GD+GV G+N  + +AL
Sbjct: 492 LTQACEQYAEYLRPLQISDPSSVPSAIEAIARFNQYRILCAMRSGDYGVEGINQTVTKAL 551

Query: 560 NAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRDRDDDQGRLKVYFELPDGSI 619
           +  KLI  Q+E +Y GRPI++  ND+ LGL+NGDIGL ++D D  + RL  +F   DG +
Sbjct: 552 SQAKLIHPQQE-FYLGRPIIIQSNDYNLGLFNGDIGLILQDEDRPE-RLMAHFIKADGKL 609

Query: 620 KAVLPSRVPQHETAYAMTIHKSQGSEFDLTLLILPPDYS----PILTRELVYTGITRAKK 675
             VLP+R+P HET YAMT+HKSQGSEF+   L+LPP+ S     +LT+ELVYT ITRAK+
Sbjct: 610 LKVLPARLPSHETCYAMTVHKSQGSEFNRVALVLPPNPSLVQWQLLTKELVYTAITRAKQ 669

Query: 676 QLKLYCDNKVLQRAIKVKTQRASGLVARL 704
                   +V +RA +  TQRASGL  RL
Sbjct: 670 HFSCLGTQQVFERASQQATQRASGLADRL 698