Pairwise Alignments

Query, 368 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., probable membrane-bound lytic transglycosylase A from Synechococcus elongatus PCC 7942

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 81/268 (30%), Positives = 124/268 (46%), Gaps = 21/268 (7%)

Query: 98  QAAQLGGGDKQGNVLFTGYFSPVIELRHQPDSVFKYPVYGLP----KCNKNCPTRAEIY- 152
           Q  Q  G D    V FT Y+  V          ++YP+Y  P    +  +   TR +I  
Sbjct: 132 QLWQSPGLDNNNRVDFTAYYEAVYPASLTRTETYRYPLYRRPADFDRWAQPHLTRRQIEG 191

Query: 153 -QGALDGQ----GLELGYAENLIDPFIMEVQGSGFVHF--GDDDTLEYFAYAGKNNKAYV 205
             G L  +    G EL +  + +  F++ VQGS  +    G + T+    YAG     Y 
Sbjct: 192 EDGLLGDRSPLAGTELVWLSDRLAAFLVHVQGSARLQLTNGREFTV---GYAGATQHPYR 248

Query: 206 SIGKVLIERGLVEREKMSLKAIKDWVLANDEATVRELLEENPSFVFFKPSAAAPVKGSAG 265
           SIG+ L++ G+   E ++L  + +W  AN +  + + L  N  FVFFKP+A A   GS  
Sbjct: 249 SIGQELVQDGVFTAEALTLGKLINWFAANPDR-LSDYLPRNDRFVFFKPTAGAAATGSLS 307

Query: 266 IPLLPMASVAGDRSILPMGTPILAEVPLLNADGTWSGAHQLRLLIVLDTGGAVK-QNHLD 324
            PL P  S+A D+++ P G   L + PL    G  S     R ++  DTG A++    +D
Sbjct: 308 QPLTPGRSIATDKTLFPPGALALIKAPLAGDRGGLS----YRYVLDQDTGSAIRGYGRVD 363

Query: 325 LYHGMGPRAGLEAGHYKHFGRVWKLGLE 352
           ++ G G  A   AG     G ++ L L+
Sbjct: 364 VFWGTGATAKARAGDVNGPGSLYYLLLK 391