Pairwise Alignments

Query, 368 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., murein transglycosylase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  419 bits (1076), Expect = e-122
 Identities = 207/361 (57%), Positives = 260/361 (72%), Gaps = 4/361 (1%)

Query: 3   KRLLSLASLALLFGCAQQPN-DRAQQYQQQTFPHILNRADVVESNKPRDYTEFSKQSELV 61
           K L  +   A++  CA QP+ +  ++Y        LN    V+S+  R+YT F+ QS LV
Sbjct: 7   KSLSCVVLAAVISACASQPDRELGKRYLDGELQQPLNWVAAVQSDANRNYTRFADQSSLV 66

Query: 62  VQGSASMAKIYRPLYEQLNEWVLQSGDPATLAQFGIQAAQLGGGDKQGNVLFTGYFSPVI 121
           ++ S  +A  Y PLY QL++W+   GDP +L  FGI+AAQ GG D+QG+VLFTGYFSPV+
Sbjct: 67  LERSPRLASRYAPLYRQLSQWLESGGDPLSLGNFGIEAAQFGGADRQGHVLFTGYFSPVL 126

Query: 122 ELRHQPDSVFKYPVYGLPKC---NKNCPTRAEIYQGALDGQGLELGYAENLIDPFIMEVQ 178
           E+RH PDS F+YP+YG+P C   N  CP+R  I QGAL GQGLEL Y+++LID F+MEVQ
Sbjct: 127 EVRHSPDSRFQYPLYGVPDCVKHNSPCPSREAILQGALSGQGLELAYSDSLIDSFLMEVQ 186

Query: 179 GSGFVHFGDDDTLEYFAYAGKNNKAYVSIGKVLIERGLVEREKMSLKAIKDWVLANDEAT 238
           GSGFVH+GD+D L+Y  Y GKN  AY SIGKVLIE+G V +E+MSL+AIK W  ++ E  
Sbjct: 187 GSGFVHYGDNDELQYLGYGGKNGHAYRSIGKVLIEQGEVAKEQMSLRAIKAWADSHSEDE 246

Query: 239 VRELLEENPSFVFFKPSAAAPVKGSAGIPLLPMASVAGDRSILPMGTPILAEVPLLNADG 298
           V++LL  N SFVFF+      V GSAGIPLLPMA+VA D+ +LPMGTP+LAEVPLL+  G
Sbjct: 247 VKQLLAHNASFVFFQARPNHDVLGSAGIPLLPMAAVAADKQLLPMGTPLLAEVPLLDDVG 306

Query: 299 TWSGAHQLRLLIVLDTGGAVKQNHLDLYHGMGPRAGLEAGHYKHFGRVWKLGLENSPTQA 358
            W+G H+LRLLI LDTGGAV   HLDLYHGMGP AG+ AGHYKHFGRVW+LGL    +  
Sbjct: 307 NWTGRHELRLLIALDTGGAVDGGHLDLYHGMGPEAGMAAGHYKHFGRVWRLGLGAGSSVT 366

Query: 359 P 359
           P
Sbjct: 367 P 367