Pairwise Alignments

Query, 368 a.a., murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., putative membrane-bound lytic murein transglycosylase A from Phaeobacter inhibens DSM 17395

 Score =  130 bits (328), Expect = 4e-35
 Identities = 90/263 (34%), Positives = 136/263 (51%), Gaps = 25/263 (9%)

Query: 112 LFTGYFSPVIELRHQPDSVFKYPVYGLPKCNKNCP---TRAEIY-QGALDGQGLELGYAE 167
           LFTGYF P +    +P S ++YPVY  P  ++      TR E+   G ++G+GLE+ + +
Sbjct: 101 LFTGYFEPELSGARRPSSRYRYPVYRQPPESRKISQWLTRRELLTSGVMEGRGLEIAWVD 160

Query: 168 NLIDPFIMEVQGSGFVHFGDDDTLEYFAYAGKNNKAYVSIGKVLIERGLVEREKMSLKAI 227
           + ++ F +++QGSG +   D  ++    Y G N   Y SIG  L+ RG+    ++S   I
Sbjct: 161 DPVELFFLQIQGSGRIRLPDGSSIR-VGYGGANGHEYRSIGTELVRRGIYNIHQVSAAVI 219

Query: 228 KDWVLANDEATVRELLEENPSFVFFK-----PSAAAPVKGSAGIPLLPMASVAGDRSILP 282
           K WV  N  A   +LL  NPS+VFF+     P++A P+ G+    +  + S+A D    P
Sbjct: 220 KRWVRRNPLAG-EDLLMHNPSYVFFREVSRIPASAGPL-GAMNRSVTTLRSLAVDPRFTP 277

Query: 283 MGTPILAEVPLLNADGTWSGAHQLRLLIVLDTGGAVK-QNHLDLYHGMGPRAGLEAGHYK 341
           +G P+      L  DG        RL+I  DTG A+K     D++ G G  AG+EAG  +
Sbjct: 278 LGAPV-----WLEKDG---AKPMRRLMIAQDTGSAIKGAQRADVFFGSGDEAGIEAGKLR 329

Query: 342 HFGRVWKLGLENSPTQAPWALPP 364
             GR+  L     P Q  +AL P
Sbjct: 330 DPGRMVVL----LPIQRAYALLP 348