Pairwise Alignments

Query, 403 a.a., cysteine desulfurase CsdA from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., cysteine desulfurase NifS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  108 bits (271), Expect = 2e-28
 Identities = 105/394 (26%), Positives = 168/394 (42%), Gaps = 41/394 (10%)

Query: 24  VYLDSAATTQKPQCVIDAISHYYSQHNANVHRGSHSLTAQATSQFEGAREQVAQFIGAPS 83
           VY D+ ATT+    V+ A+  Y+ +   N     H+           AREQVA+ IGA +
Sbjct: 4   VYFDNNATTRVDPAVLAAMLPYFGELYGNPS-SMHTFGGHVGRAVREAREQVARLIGA-T 61

Query: 84  SKNIIWTRGATEALNLIAQSYARSTLQAGDE---ILVSETEHHANIVPWQMVAEQTGAKV 140
            + I++T   TE  N    +  R+ L A  E   I+ +  EH A ++      E+ G ++
Sbjct: 62  PEEIVFTSCGTEGDN----TAIRAALAAQPEKKHIITTRVEHPA-VLSLSQHLEKNGYEL 116

Query: 141 VKIPMTTTGEFGLAAFRQLLSPRCKIVALAHITNVTGTRQPIEAVIQAAHQQGAIVVIDG 200
             + +   G   L   R+ +     IV++    N TGT  P+        ++G     D 
Sbjct: 117 TLLGVDDKGRMDLDELREAIRKDTAIVSIMFANNETGTIFPVAEAAAICKERGVPFHTDA 176

Query: 201 AQGIVHETVDVRALDADFYVFSGHKLYAPAGIGVLYGKTALLEAMPPWHGGGKMVEKVSF 260
            Q +    +DVR L  D+ V SGHKL+AP GIG LY +     A  P+  GG        
Sbjct: 177 VQAVGKLAIDVRELPVDYLVLSGHKLHAPKGIGALYVRRG--AAYRPFLRGGHQER---- 230

Query: 261 DGTTFTGLPGKFEAGTPNVAGAIALATAIDWYQSLDRAAVEAHLHQLQQQAYQA-ISQID 319
                    G+   GT NV   I L  A D   + + A     +  L+ +  Q  ++ I 
Sbjct: 231 ---------GR-RGGTENVPAIIGLGMACD-LAAANMAEENTRVRALRDRLEQGLLAAIP 279

Query: 320 DIRVLGYQPN--ASVLSLVMDGVHHQDLATLLDQQGIAVRAGHHCAHPLMD------AFG 371
           D  V G   N   +  ++    V  + +  LLDQ G+   +G  C    ++      A G
Sbjct: 280 DAIVNGDPANRLPNTTNISFKYVEGEAILLLLDQLGVCASSGSACTSGSLEPSHVLRAMG 339

Query: 372 V-----KGTVRISFGVYNSAEEVERLIAAIHKAV 400
           V      G++R S   +N+ EEV+ ++  + + +
Sbjct: 340 VPFTYAHGSIRFSLSRFNTQEEVDHVVRELPRVI 373