Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., Nucleoside-binding outer membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 26/215 (12%)

Query: 68  DLYGYVDVF----NLATNKSSDKVGDPKIFM-KFAPRMSLDAFTGVDMSFGPVQEVYVAS 122
           D + Y D F     +  N   D    P  +  +F+PR+S        +  GP+++V +A 
Sbjct: 57  DAWKYGDNFFFLDRIFYNGQDDSQSGPNTYYGEFSPRLSFGKIFDQKLELGPIKDVLLAM 116

Query: 123 LFEWDGTDFKTNAFSVNNQKIGLGSDVMVPWFGKVGLNLYGTY-DGNRKDWNGFQISTNW 181
            +E+   D ++         IG G D+ +P F    LN Y    +G R   N +QI+  W
Sbjct: 117 TYEFGEGDNESYL-------IGPGFDLAIPGFDYFQLNFYNRQTEGPRAGDNVWQITPTW 169

Query: 182 FKPFYFFENGSF-ISYQGYIDYQFGLKDEYSTASNGGAMFN---------GIYWHSDRFA 231
               Y    GS  +   G+ID+            +     N          +   + +  
Sbjct: 170 A---YTIPMGSSDLLIDGFIDWVVDNDTNSKGTYHANLHINPQIKYDLGKALKLGAKQLY 226

Query: 232 VGYGLKGYKDVYGIKDTDGFKSTGFGHYVAVTYKF 266
           VG     +K+ YGI+D+DGFK+        + Y F
Sbjct: 227 VGVEYDYWKNKYGIEDSDGFKTNQSNTSFLLKYHF 261