Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., Nucleoside-specific channel-forming protein Tsx precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 28/264 (10%)

Query: 28  IHKNDYKWMQFNLMGAFDELPGKSSHD--YLEMEFGGRSGIFDLYGYVD---VFNLAT-- 80
           ++ +D+      L+G+ D   G    D  YLE E+ GR G F+LYGYVD   +FN+    
Sbjct: 56  VYLSDWYNQDLTLIGSKDISFGPQPVDDVYLEYEYFGRKGPFELYGYVDIPKIFNIGNSH 115

Query: 81  NKSSDKVGDPKIFMKFAPRMSLDAFTGVDMSFGPVQEVYVASLFEWDGTDFKTNAFSVNN 140
           +K     G P +FM+  PR+S+D   G  ++ GP +E YVA  F+W       +A   N 
Sbjct: 116 DKGVWDHGSP-VFMEHEPRISIDYLAGRSLAIGPFKEWYVA--FDWIYDHGSNSANRANT 172

Query: 141 QKIGLGSDVMVPWFGKVGLNLYGTYD------GNRKDWNGFQISTNWFKPFYFFENGSFI 194
              GLG+D+       +  N YG Y        N   W+G++    +  P   F NG+ +
Sbjct: 173 LYSGLGTDIDTHSRVNLSANFYGRYQWENYGASNEYSWDGYRAQLKYIVPISQFSNGASL 232

Query: 195 SYQGYIDYQFGL---KDEYSTASNGGAMFNGI---YWHSDRFAVG---YGLKGYKDVYGI 245
           +Y G+ ++ FG    KD  +  +N     N +   + H     VG   +    ++D   +
Sbjct: 233 TYIGFTNFDFGSDLHKDNPARTANATVATNVLLYSFTHLRFTLVGRYFHNGGNWQDGSEL 292

Query: 246 KDTDG---FKSTGFGHYVAVTYKF 266
              DG    +S G+G+Y  V Y+F
Sbjct: 293 NFGDGNFRARSDGWGYYAGVGYQF 316