Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Nucleoside-binding outer membrane protein from Pseudomonas stutzeri RCH2

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 23/201 (11%)

Query: 68  DLYGYVDVFNLATNKSSDKVGDPKIFMKFAPRMSLDAFTGVDMSFGPVQEVYVASLFEWD 127
           D + +VD  +     + +   D   + +F+PR+S       D+S GP+ +V VA  +E+ 
Sbjct: 64  DTFFFVDSIHYNGKGNDNGRDDSSFYGEFSPRLSFGKIFQRDLSIGPITDVLVAMTYEFG 123

Query: 128 GTDFKTNAFSVNNQKIGLGSDVMVPWFGKVGLNLY-GTYDGNRKDWNGFQISTNWFKPFY 186
             D +T         IG G D+ VP F    +N Y    DG+R     +QI+  W   + 
Sbjct: 124 EGDVET-------YMIGPGFDLNVPGFDYFSVNFYHRNTDGDRVGDGVWQITPVW--GYT 174

Query: 187 FFENGSFISYQGYIDYQFGLKDEYSTASNGGAMFN-----------GIYWHSDRFAVGYG 235
                S I   G+ID+     D  S      A F+            + W   +  VG  
Sbjct: 175 LPVGNSDILIDGFIDWVVD-NDRNSRGEEYHANFHFNPQIKYDLGKAMNWGEKQLYVGIE 233

Query: 236 LKGYKDVYGIKDTDGFKSTGF 256
              + + YGI+D  G+ S  F
Sbjct: 234 YDYWTNKYGIED-GGYVSQNF 253