Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 35/212 (16%)

Query: 1   MRKSLLALSLLAATSAPVLAADYSDGDIHKNDYKWMQFNLMGAFDE---LPGKSSHDYLE 57
           M+K+ L L+L+ +  A         GD+     +W  F+    + E   L        + 
Sbjct: 1   MKKTCLCLALMLSPQAFA-------GDL----VQWWDFSATALYGEDYDLAPSDKQATVT 49

Query: 58  MEFGGRSGIFDLYGYVDVFNLATNKSSDKVG-DPKIFMKFAPRMSLDAFTGVDMSFGPVQ 116
           +E  G     D + + D          D  G D   + + +PR S     G  ++FGP+ 
Sbjct: 50  LETAGAWKYGDWFAFQDFIYF----KGDHTGMDSTTYGEISPRFSASKILGEKIAFGPIT 105

Query: 117 EVYVASLFEWDGTDFKTNAFSVNNQKIGLGSDVMVPWFGKVGLNLYGTYDGNRKDWNGFQ 176
           ++ +A  +E            V++   GLG DV VP+F  +  N Y      R   +   
Sbjct: 106 DLSLALTYE-------EGEGPVHSLLYGLGVDVAVPYFTYLNFNTY-----RRNGMSSGN 153

Query: 177 ISTNW-FKPFYFFE---NGSFISYQGYIDYQF 204
           IS  W F P +  +     + I   G+ID+ F
Sbjct: 154 ISDGWQFTPVFRIDIPVGSANIILDGFIDWVF 185