Pairwise Alignments

Query, 266 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., nucleoside-specific channel-forming protein Tsx from Klebsiella michiganensis M5al

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 34/297 (11%)

Query: 1   MRKSLLALSLLAATSAPVLA-ADYSDGDIHKNDYKWMQFNLMGAFDELPGKSSHD--YLE 57
           M+K+LLA     A SA   A A  +D   + +D+     N++G++    G    +  YLE
Sbjct: 1   MKKTLLAAGAALALSASFSASAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE 60

Query: 58  MEFGGRSGIFDLYGYVDV---FNLATNKSSDKVGDPKIFMKFAPRMSLDAFTGVDMSFGP 114
            E   +   FD YGY+D    F   TN          +FM+  PR S+D  TG D+SFGP
Sbjct: 61  YEAFAKKDWFDFYGYMDAPVFFGGNTNAKGIWNHGSPLFMEIEPRFSIDKLTGTDLSFGP 120

Query: 115 VQEVYVASLFEWDGTDFKTNAFSVNNQKIGLGSDVMVPWFGKVGLNLYGTYD------GN 168
            +E Y A+ + +D    K+   S     +GLG+D+       + LN+Y  Y        N
Sbjct: 121 FKEWYFANNYIYDMGRNKSGRQS--TWYMGLGTDIDTGLPMSLSLNVYAKYQWQNYGASN 178

Query: 169 RKDWNGFQISTNWFKPFYFFENGSFISYQGYIDYQFG----------LKDEYSTASNGGA 218
             +W+G++    +F P      GS +SY G+ ++ +G          L  ++S  SN  A
Sbjct: 179 ENEWDGYRFKVKYFVPLTDLWGGS-LSYIGFTNFDWGSDLGDDNSYDLNGKHSRTSNSIA 237

Query: 219 -----MFNGIYWHSDRFAVGYGLKG-YKDVYGIKDTDG---FKSTGFGHYVAVTYKF 266
                  N  +WH    A  +   G + D   +   DG    ++TG+G Y  V Y F
Sbjct: 238 SSHILALNYDHWHYSVVARYFHNGGQWADDAKLNFGDGDFNVRATGWGGYFVVGYNF 294