Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., AmpG family muropeptide MFS transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  204 bits (519), Expect = 6e-57
 Identities = 141/492 (28%), Positives = 246/492 (50%), Gaps = 72/492 (14%)

Query: 9   SWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68
           +W   + +Y     L + +LG A+G P++L+ S ++ WL++AG++R  IGY   +   YA
Sbjct: 5   TWRAALAAYASPSTLVLLLLGFAAGLPYMLVFSTLSVWLREAGVARETIGYASLIGLAYA 64

Query: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128
             ++W+PL+D+ +LP+L   LG+RRSW+   Q++V++  + +   +P  +L      A+ 
Sbjct: 65  FKWVWSPLLDQWRLPLL-GKLGRRRSWLVLSQALVILGLIGMGFCDPQKHLSWLIAIAVI 123

Query: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQASAMAVVGWWTGYSLPGYFAFVNADSIG-- 186
           +A ASATQD+AVDA+R++    ++ T+    +A  + G+     L    A   A+  G  
Sbjct: 124 VAFASATQDIAVDAYRLEI---ADDTRQAALAASYMSGYRIAALLATAGALFFAEGFGST 180

Query: 187 --------WNGVYYIMAGVVGLLMLFTLLVGEPHTQ-RDQLQQLAEERHQQVVSNPVLSW 237
                   W G Y +   ++   +L +L + EP    R QLQ        Q+ S  VL  
Sbjct: 181 GFSYKHSAWAGTYLLFGVLMVPALLTSLFMREPPVPLRTQLQAGRYTFVHQLASVFVLIV 240

Query: 238 LTVTVLEPFIDFFR-----------------------------------------RNGFR 256
           L V+V   F   F                                          R G  
Sbjct: 241 LLVSVPAMFTQLFNTDFASVLFEGVSLLDLLLEDRAFLRAILYTILTALCLSAMGRRGLA 300

Query: 257 VALT---------------LLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKLLG 301
             LT               LL  +  +++ +  +G M+  FY + GF+ +QI   SK+ G
Sbjct: 301 PVLTPINDFILRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFTKDQIASVSKIFG 360

Query: 302 WGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFVDNF 361
             +T++   +G L+ ++FGI+  L IGG+A A++N++F  +  +G N  + + T+ +DNF
Sbjct: 361 LIMTLVGAGMGGLLIVRFGILPILFIGGVASAATNILFLMLTDMGANLKMLIVTISLDNF 420

Query: 362 TSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDWSLFFIL 421
           +S  +T AFV++L+ +T   FSATQYALL+S+  L    I  +SG + +    +  FF++
Sbjct: 421 SSGLATSAFVAYLSSLTNLKFSATQYALLSSIMLLLPRLIGGYSGVMVEKFG-YHNFFLI 479

Query: 422 TAVMVIPSLIML 433
           TA++ +P+L+++
Sbjct: 480 TALLGVPTLLLI 491