Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., AmpG-related permease from Pseudomonas stutzeri RCH2

 Score =  129 bits (324), Expect = 3e-34
 Identities = 72/192 (37%), Positives = 120/192 (62%), Gaps = 2/192 (1%)

Query: 242 VLEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKLLG 301
           VL P  DF  R  ++ AL LL  +  +++ +  +G M+  FY + GFS ++I   SKL G
Sbjct: 354 VLTPITDFIVRYRWQ-ALLLLGLIATYRMSDTVMGVMANVFYIDQGFSKDEIASVSKLFG 412

Query: 302 WGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFVDNF 361
             +T+L    G L+ ++F I+  L IGG+A A++NLMF  + ++G N  + + T+  DNF
Sbjct: 413 LVMTLLGAAFGGLLIVRFSILPILFIGGVASAATNLMFMLLVEMGANLQMLIVTISCDNF 472

Query: 362 TSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDWSLFFIL 421
           +   ++ AFV++L+ +T   FSATQYALL+SL  L    +  +SG + + L  +S FF++
Sbjct: 473 SGGLASTAFVAYLSSLTNLKFSATQYALLSSLMLLLPRLLGGYSGVMVESLG-YSNFFLV 531

Query: 422 TAVMVIPSLIML 433
           TA++ IP+L+++
Sbjct: 532 TALLGIPTLVLI 543



 Score =  113 bits (283), Expect = 1e-29
 Identities = 62/200 (31%), Positives = 114/200 (57%), Gaps = 4/200 (2%)

Query: 9   SWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68
           +W + + +Y     L + +LG A+G P VL+ S ++ WL++AG+SR  IG+   +   YA
Sbjct: 5   TWRDALAAYASPATLALLLLGFAAGLPAVLVFSTLSVWLREAGVSRETIGFASWISLAYA 64

Query: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128
             ++W+P++D+ +LP + S LG+RRSW+   Q+++ +  + +A  NP +NL +    A+ 
Sbjct: 65  FKWVWSPMLDQWRLPWIGS-LGRRRSWLVLSQALIAIGLIGMALCNPQHNLTMLIALAVV 123

Query: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQASAMAVVGWWTGYSLPGYFAFVNADSIGWN 188
           +A +SATQD+A+DA+R++    +E       +A  + G+     L    A   A+ +G +
Sbjct: 124 VAFSSATQDIAIDAYRLEI---AEDKLQATLAASYMTGYRIAMLLASAGALFLAEWLGSS 180

Query: 189 GVYYIMAGVVGLLMLFTLLV 208
            + Y  A      ++F LL+
Sbjct: 181 SLDYNQAAWTTTYLVFALLI 200



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 24/198 (12%)

Query: 259 LTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKL-LGWGITILFT-------- 309
           L LLL  F   +    +      + +E G S E IG+ S + L +    +++        
Sbjct: 19  LALLLLGFAAGLPAVLVFSTLSVWLREAGVSRETIGFASWISLAYAFKWVWSPMLDQWRL 78

Query: 310 -LLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFVDNFTSAFSTV 368
             +GSL     G  R  ++   A+ +  L+   +     N  + +A   V  F+SA   +
Sbjct: 79  PWIGSL-----GRRRSWLVLSQALIAIGLIGMALCNPQHNLTMLIALAVVVAFSSATQDI 133

Query: 369 AFVSFLTLMTGQAFSATQ-------YALLASLGNLGRTTIASFSGELADFLND--WSLFF 419
           A  ++   +      AT        Y +   L + G   +A + G  +   N   W+  +
Sbjct: 134 AIDAYRLEIAEDKLQATLAASYMTGYRIAMLLASAGALFLAEWLGSSSLDYNQAAWTTTY 193

Query: 420 ILTAVMVIPSLIMLYSLR 437
           ++ A++++P LI    +R
Sbjct: 194 LVFALLIVPGLITSLVIR 211