Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., Major facilitator superfamily MFS_1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 5e-33
 Identities = 74/216 (34%), Positives = 117/216 (54%), Gaps = 13/216 (6%)

Query: 5   PRSHSWLELIVSYFDRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVF 64
           P    W E +++  D R+  +  LG ++G P +L+ S ++ WL++AG+ RA +       
Sbjct: 41  PLPAGWREAVIAIGDSRVARMGFLGFSAGLPLLLVFSTLSVWLREAGIDRATVTMLSWAA 100

Query: 65  AVYAINFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSM 124
             Y+  F+WAPLVDR+ LP+L   LG+RRSW+ F Q +V +  +  A  +PA  L +T++
Sbjct: 101 LAYSFKFVWAPLVDRLPLPVL-GRLGRRRSWLAFAQGLVCLGLVWTAAFDPAVALPMTAL 159

Query: 125 FALGIAIASATQDVAVDAFRIDTFPKSESTKLPQASAMAVVGWWTGYSLPGYFAF----- 179
            A+ IA A+ATQDV +DA+RI+    +E       SA  + G+  G  + G  +      
Sbjct: 160 GAVIIAFAAATQDVVIDAYRIEA---AEPALQSLMSASYIAGYRVGMLVSGAGSLWLAAL 216

Query: 180 ----VNADSIGWNGVYYIMAGVVGLLMLFTLLVGEP 211
                  D   W  VY  MA V+ L ++ TL++ EP
Sbjct: 217 LDPGTGYDPAVWATVYRTMAAVMALGLITTLVIPEP 252



 Score =  118 bits (295), Expect = 6e-31
 Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 4/194 (2%)

Query: 241 TVLEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKEIGFSNEQIGYYSKLL 300
           T + P  DFF R G R+AL +L  +  +++ +  +G ++  FY ++GF+ EQI  Y+K  
Sbjct: 348 TYIAPIADFFGRYG-RLALLVLALIGSYRVADVAMGAIANVFYVDMGFTKEQIATYTKFW 406

Query: 301 GWGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFLATLFV-D 359
           G   T+L   LG +V ++ G++  L IG +  A SNL+FA +A   P E L+L    V D
Sbjct: 407 GLWATLLGGFLGGIVALRVGVMGALFIGAVLAALSNLLFAALAG-HPGETLWLMIAIVGD 465

Query: 360 NFTSAFSTVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDWSLFF 419
           N ++  ++ AFV++L+ +T   F+A QYAL +SL  L    +A + G + D +  ++ FF
Sbjct: 466 NLSAGMASAAFVAYLSALTSVRFTAMQYALFSSLMTLLPKVLAGYGGSVVDTVG-YASFF 524

Query: 420 ILTAVMVIPSLIML 433
           I TA + +P L+++
Sbjct: 525 IGTAALGLPVLVLV 538