Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., muropeptide MFS transporter AmpG from Rahnella sp. WP5

 Score =  200 bits (509), Expect = 8e-56
 Identities = 129/428 (30%), Positives = 214/428 (50%), Gaps = 36/428 (8%)

Query: 13  LIVSYF----DRRLLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAVYA 68
           +I  YF     R  + + +LG ASG P  L    +  W+    +    IG F  V   Y 
Sbjct: 1   MISQYFKIFTQRNTVILLLLGFASGLPLALTSGTLQAWMTVENVDLKTIGIFSLVGQAYV 60

Query: 69  INFLWAPLVDRVKLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALG 128
             FLW+P++DR       S LG+RR W+   Q +++V    +  ++P+ +L   +  A+ 
Sbjct: 61  FKFLWSPMMDRYT----PSFLGRRRGWLILTQLLLVVAIFAMGFMDPSKDLFWLAALAVL 116

Query: 129 IAIASATQDVAVDAFRIDTFPKSESTKLPQASAMAVVGWWTGYSLPGYFAFVNADS-IGW 187
           IA ASA+QD+  DA++ D  P  E       +A++V+G+     + G  A   AD  +GW
Sbjct: 117 IAFASASQDIVFDAYKTDLLPPEER---GNGAAVSVLGYRLAMLVSGGLALWLADRYLGW 173

Query: 188 NGVYYIMAGVVGLLMLFTLLVGEPHTQRDQLQQLAEERHQQVVSNPVLSWLTVTVLEPFI 247
             +Y++MAG++ + +L TLL  EP                   + P    + + V+ P  
Sbjct: 174 QHMYWLMAGMMLIGVLATLLSPEPEN-----------------TQPAPRTMEMAVVAPLK 216

Query: 248 DFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAF-YKEIGFSNEQIGYYSKLLGWGITI 306
           DFF RN    A  +LL + ++K+G+AF G +S  F  + +GF   ++G  +K LG   TI
Sbjct: 217 DFFGRNN---AWLILLLIVMYKMGDAFAGSLSTTFLIRGVGFDAGEVGLVNKTLGLMATI 273

Query: 307 LFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEHLFL-ATLFVDNFTSAF 365
           +  L G ++  +  + R LM+ GI  A SN  + WI  +   +   + A +F +N     
Sbjct: 274 IGALFGGMLMQRLSLFRALMLFGILQAVSNAGY-WILAITDKDLTTMGAAIFFENLCGGM 332

Query: 366 STVAFVSFLTLMTGQAFSATQYALLASLGNLGRTTIASFSGELADFLNDWSLFFILTAVM 425
            T AFV+ L  +  ++FSATQ+ALL++L  +GR  +   +G   +    W  F++ + V 
Sbjct: 333 GTAAFVALLMTLCNRSFSATQFALLSALSAVGRVYVGPIAGWFVEAYG-WPWFYLFSIVA 391

Query: 426 VIPSLIML 433
            +P L++L
Sbjct: 392 AVPGLLLL 399