Pairwise Alignments

Query, 462 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., putative signal transducer (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 74.3 bits (181), Expect = 7e-18
 Identities = 94/446 (21%), Positives = 176/446 (39%), Gaps = 64/446 (14%)

Query: 22  LLWVFMLGCASGFPWVLIGSNMTGWLKDAGLSRAAIGYFGSVFAV-YAINFLWAPLVDRV 80
           + WV     A G P++ I        KD G+S   I ++ S+  + + + FLW+P ++  
Sbjct: 16  IYWVPTAYFAMGLPFIAINLVSVFMFKDLGISDTQITFWTSLIMMPWTLKFLWSPFLEMY 75

Query: 81  KLPILHSMLGQRRSWIFFCQSIVLVCTLLIAGVNPANNLMLTSMFALGI------AIASA 134
           +      ++ +  S I F             GV  A +L     FA+ I      A + A
Sbjct: 76  RTKKFFVLVTELLSGILF-------------GV-VAFSLFFDYFFAISISTMAVIAFSGA 121

Query: 135 TQDVAVDAFRIDTFPKSESTK--------------LPQASAMAVVGWWTGY--SLPGYFA 178
           T D+A D   +    K +  K              +     +A+ G    Y  ++ G   
Sbjct: 122 THDIACDGVYMAELNKEDQAKYIGVQGAFYNVAKLVANGGLVALAGMLAEYFGAIEGASI 181

Query: 179 FVN--ADSIGWNGVYYIMAGVVGLLMLFTLLVGEPHTQRDQLQQLAEERHQQVVSNPVLS 236
             N  A S  W  ++ ++A V+ LL L+ + +  P TQ     + +     Q + N + +
Sbjct: 182 DANKGAYSSAWMIIFAVIAAVMVLLGLYHIKM-LPSTQVPATGKKSTSEIMQDLVNVIGN 240

Query: 237 WLTVTVLEPFIDFFRRNGFRVALTLLLFVFLFKIGEAFLGRMSIAFYKE------IGFSN 290
           + T   +  +I                F+ L+++ E F+ +++  F +       +G S 
Sbjct: 241 FFTKKHIVYYI---------------FFIILYRLAEGFIMKVAPLFLRASREVGGLGLSL 285

Query: 291 EQIGYYSKLLGWGITILFTLLGSLVNIKFGIVRGLMIGGIAMASSNLMFAWIAKVGPNEH 350
            +IG  + + G    ++ +LLG +   ++G+ + L +         L + ++A V P   
Sbjct: 286 TEIGTLNGVFGSAAFVIGSLLGGIFVARYGLKKTLFMLCCVFNLPFLAYTFLAVVQPTSL 345

Query: 351 LFLAT-LFVDNFTSAFSTVAFVSFLTLMTGQA-FSATQYALLASLGNLGRTTIASFSGEL 408
             + T + ++ F   F  V    F+           + YA  + + NLG       SG  
Sbjct: 346 YLIGTCITMEYFGYGFGFVGLTLFMMQQIAPGKHQMSHYAFASGIMNLGVMLPGMISGYF 405

Query: 409 ADFLNDWSLFFILTAVMVIPSLIMLY 434
           +D L  +  FFI   +  IP+ +M Y
Sbjct: 406 SDLLG-YRSFFIYVLIATIPAFLMTY 430