Pairwise Alignments

Query, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) from Pseudomonas fluorescens FW300-N2E2

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 4/147 (2%)

Query: 200 ITLTNLPNVYSGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLNPQAKITC 259
           + + +LP V+S   LD GS  +LEHL   P+    +D GCG GVL   + +  P   +T 
Sbjct: 162 LKVISLPGVFSHGRLDRGSALLLEHLDKLPS-GHLLDFGCGAGVLGAAVKRRYPHNTVTL 220

Query: 260 VDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQTITDHIA 319
           +D    A AS++  L  N  + ++  +  + +D  P    S I+ NPPFH       H  
Sbjct: 221 LDVDAFAAASSRLTLAANGLEAEV--LTGDGIDAAPM-GLSAILSNPPFHVGVHTDYHAT 277

Query: 320 WQMFCDSKHVLKKGGKLWVIGNRHLGY 346
             +   +   LK GG+L ++ N  L Y
Sbjct: 278 ENLLRKAAKHLKNGGELRLVANSFLKY 304