Pairwise Alignments

Query, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., 16S RNA G1207 methylase RsmC from Pseudomonas stutzeri RCH2

 Score = 73.9 bits (180), Expect = 6e-18
 Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 12/278 (4%)

Query: 103 PVPNDASVVLLQLPKSNRHLVWILSQLRKALSPNIPIIAVNKAKEIHTSTLNLFE----K 158
           P P +    +L LPKS     ++L  L   L+     +   K   +  +   L      +
Sbjct: 63  PPPGEYDAAVLFLPKSRELTDYVLQALAAQLAGRPLYLVGEKRAGVERAAKQLANLGRAR 122

Query: 159 HLGPTTTSLAWKKHRLVFSSATVNPANEVNPECGWSIEPYAITLTNLPNVYSGESLDLGS 218
            L        W+    +  +  V   + +       +E   + + +LP V+S   LD+GS
Sbjct: 123 KLDSARHCQLWQGE--IEQAPAVPELDALAHHFTLELEDGPLQVISLPGVFSHGRLDVGS 180

Query: 219 RFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLNPQAKITCVDESFMAIASAQKNLHDNL 278
             +LEHL   P+    +D GCG G+L   L +  PQ+++  +D    A+ S+++ L  N 
Sbjct: 181 ALLLEHLDNLPSGR-VLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANG 239

Query: 279 GKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQTITDHIAWQMFCDSKHVLKKGGKLWV 338
            + ++  IA + +D  P   ++ IV NPPFHQ    +   +  +   +   L  GG+L +
Sbjct: 240 LEAEV--IAGDGIDTAPRQLAA-IVSNPPFHQGVHTSYQASETLIERAAEHLSSGGELRL 296

Query: 339 IGNRHLGYDVKLARLFGKSHVRVIANNSKFVILQAIKS 376
           + N  L Y   + +  G    + I   + F I +A +S
Sbjct: 297 VANAFLRYPPLIEQHLGA--CQTIVERNGFRIYRAKRS 332