Pairwise Alignments

Query, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (660), Expect = 2e-73
 Identities = 146/388 (37%), Positives = 228/388 (58%), Gaps = 17/388 (4%)

Query: 1   MKTELTLLEQTLTLHRFPKRNNETLQAWDAGDEYLIQHVEQLALPESSHIVIINDHFGTL 60
           M T+ ++ +  L+L R+P      LQAWDA DE+LI+H++++   ++ +  +IND FG L
Sbjct: 1   MTTQFSVADIELSLSRYPANQVSNLQAWDAADEHLIKHLKEIE-QKADNTAVINDSFGAL 59

Query: 61  SCWFSQKHK---VSMMSDSYIAHQATQANLQQNQRPPVQL--LTTLDPVPNDASVVLLQL 115
               + +     + + +D+  +   T  N   N+     L  L + +  P   ++VL++L
Sbjct: 60  CAALTAQAADWPIWVETDAKTSQLGTLQNFNANRLSDSNLTWLNSRELPPQGINLVLMKL 119

Query: 116 PKSNRHLVWILSQLRKALSPNIPIIAVNKAKEIHTSTLNLFEKHLGPTTTSLAWKKHRLV 175
           PK+  + +  L +L ++L+PN P+    KAK I+ + L    KHLGP + SLAWKK R++
Sbjct: 120 PKNLNYFIHQLQRLSQSLAPNTPVYIGAKAKSINKALLETIAKHLGPASASLAWKKTRVI 179

Query: 176 FSSATVNPANEVNPECGWSIEPYAITLTNLPNVYSGESLDLGSRFILEHLPADPTLEDFI 235
              A   P   +  E  W+++ + ++++NL NV++   LD+G+R +L++LP +   +  +
Sbjct: 180 TCIADGKP-RALPSEVSWAVKEFNLSISNLSNVFAANKLDIGARIMLDNLP-EGHFDTIV 237

Query: 236 DLGCGNGVLSVRLGQLNPQAKITCVDESFMAIASAQKNLHDNL------GKRDIHCIANN 289
           DLGCGNG+L +R  Q  P A++  VD+S MAI SA++N   N        K   H   ++
Sbjct: 238 DLGCGNGILGLRAKQCYPNAEVHFVDDSEMAITSARQNWQANKLDNPEQAKPQGHFHWDD 297

Query: 290 CLDGFPAH-SSSMIVCNPPFHQQQTITDHIAWQMFCDSKHVLKKGGKLWVIGNRHLGYDV 348
           CL          +++CNPPFHQ + ITDHIAWQMF D+ H L+ GG L V+GNRHLGY V
Sbjct: 298 CLTHLGDEVKPDLVLCNPPFHQGEAITDHIAWQMFLDAFHQLRPGGMLQVVGNRHLGYHV 357

Query: 349 KLARLFGKSHVRVIANNSKFVILQAIKS 376
           KL R+F   +    A+N KFVIL+AIKS
Sbjct: 358 KLKRIF--KNCETAASNGKFVILRAIKS 383