Pairwise Alignments

Query, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 19/274 (6%)

Query: 103 PVPNDASVVLLQLPKSNRHLVWILSQLRKALSPNIPIIAVNKAKEIHTSTLNLFEKHLGP 162
           P  N  + V++  PK+     ++ +   + L PN  ++ V + K    S + L   +   
Sbjct: 83  PHQNKYNTVIVYFPKAKPLAPYLFNLAAQHLVPNGQLLVVGENKGGIKSLVKLLPNYFA- 141

Query: 163 TTTSLAWKKHRLVFSSATVNPANEVN-----PECGWSIEPYAITLTNLPNVYSGESLDLG 217
               L   +H L+F S+ ++ A E+       +   S     IT+ NL  V+S + LD G
Sbjct: 142 AGVKLDNARHSLLFGSSLIDTAPEITLSDWASQYQLSTPQGNITICNLVGVFSEKHLDQG 201

Query: 218 SRFILEHLPADPTLED-FIDLGCGNGVLSVRLGQLNPQAKITCVDESFMAIASAQKNLHD 276
           +  +L HLP   TL    +D GCG GV++  L +  P   + C+D + MA+AS +  L  
Sbjct: 202 TELLLSHLP---TLSGRVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAA 258

Query: 277 NLGKRDIHCIANNCLDGFPAHSSSM--IVCNPPFHQQQTITDHIAWQMFCDSKHVLKKGG 334
           N     ++       DG    S     I+ NPPFH     T +IA +   DS   L+  G
Sbjct: 259 NGMMAKVYPS-----DGLAQTSGKFDGIISNPPFHDGLASTTNIAQRFVADSAKQLQSKG 313

Query: 335 KLWVIGNRHLGYDVKLARLFGKSHVRVIANNSKF 368
              ++ NRHL Y   +A  FG+  + V A N+K+
Sbjct: 314 IWQIVANRHLPYSDTIAAEFGQ--LTVPAENNKY 345