Pairwise Alignments

Query, 376 a.a., ribosomal RNA large subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., 16S rRNA m(2)G 1207 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 85/297 (28%), Positives = 133/297 (44%), Gaps = 24/297 (8%)

Query: 80  HQATQANLQQNQRPPVQLLTTLDPVPNDASVVLLQLPKSNRHLVWILSQLRKALSPNIPI 139
           H A QAN +       QL     P  +    V++  PK+     ++ +   + L  +  +
Sbjct: 65  HLAPQANAKLRCYFGHQL-----PHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQL 119

Query: 140 IAVNKAKEIHTSTLNLFEKHLGPTTTSLAWKKHRLVFSSATVNPANEVN-----PECGWS 194
           + V + K    S + L  K+   T   L   +H L+F S+ ++ A E+       +   S
Sbjct: 120 LVVGENKGGVKSLVKLLPKYFA-TGVKLDNARHCLLFGSSLIDTAPEIKLSDWTSQYQLS 178

Query: 195 IEPYAITLTNLPNVYSGESLDLGSRFILEHLPADPTLED-FIDLGCGNGVLSVRLGQLNP 253
                IT+ NL  V+S + LD G+  +L HLP   TL    +D GCG GV++  L +  P
Sbjct: 179 TPQGNITICNLVGVFSEKHLDQGTELLLSHLP---TLSGRVLDFGCGAGVIAAALLKAQP 235

Query: 254 QAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSM--IVCNPPFHQQ 311
              + C+D + MA+AS +  L  N     ++       DG    S     I+ NPPFH  
Sbjct: 236 TLSLECIDINAMALASCELTLAANGMTAKVYPS-----DGLAQTSGKFDGIISNPPFHDG 290

Query: 312 QTITDHIAWQMFCDSKHVLKKGGKLWVIGNRHLGYDVKLARLFGKSHVRVIANNSKF 368
              T  IA +   DS   L+  G   ++ NRHL Y   +A  FG+  + V A N+K+
Sbjct: 291 LASTTSIAQRFVADSAKQLQSKGIWQIVTNRHLPYSDTIAAEFGQ--LTVPAENNKY 345