Pairwise Alignments

Query, 446 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit from Pseudomonas stutzeri RCH2

 Score =  504 bits (1297), Expect = e-147
 Identities = 255/447 (57%), Positives = 330/447 (73%), Gaps = 3/447 (0%)

Query: 1   MITIKKGLDLPIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFED 60
           MI IK+GLDLPIAG P+Q I  G+ ++ VA++G +Y  M+PTM V+VGD VK  QILF D
Sbjct: 1   MINIKRGLDLPIAGAPAQRIEAGRPVRSVAVVGFDYPTMKPTMAVQVGDRVKLGQILFSD 60

Query: 61  KKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFEANQLASLNRDAIKT 120
           KK+ GV +TSP +G V  ++RG KRVLQSVVI++ GD+++TF  +   QL  L+ + ++ 
Sbjct: 61  KKSDGVHYTSPGAGVVSAVHRGEKRVLQSVVIDLDGDEEITFASYSPAQLDGLSSEQVRE 120

Query: 121 QLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDV 180
            L +SGLWTA RTRPFSKVPA+D+T  +IFVTA+DT+PLAA+P V+I EQ+EAF AGL V
Sbjct: 121 NLQQSGLWTALRTRPFSKVPAVDATPASIFVTAIDTHPLAADPAVIIAEQAEAFEAGLKV 180

Query: 181 LSALTTGKVYVCKK-GTSLPRSQQPNVEEHVFDGPHPAGLAGTHMHFLYPVSADHVAWSI 239
           L+ L   KV++CK    SL       V+   F GPHPAGLAGTH+HFL PVSA    W+I
Sbjct: 181 LANLA--KVFLCKAPSASLSGESLAKVQVESFSGPHPAGLAGTHIHFLDPVSASKSVWTI 238

Query: 240 NYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEVRII 299
            YQDVIAVG+LF +G L  +RVVSLAGPVV KPRLVRT +GA+L++L   E+ PG  R++
Sbjct: 239 GYQDVIAVGKLFTSGRLSVERVVSLAGPVVEKPRLVRTRLGANLDELTAGELQPGANRVV 298

Query: 300 SGSVLSGTKATGPHAYLGRYHLQVSVLREGRDKELFGWAMPGKNKFSVTRSFLGHLFKGQ 359
           SGS+L G  A G  AYLGRYH QVS LREG+++E+  +  PG  K S+   ++  L  G+
Sbjct: 299 SGSLLGGRTAHGAFAYLGRYHQQVSCLREGKEREMLHYMRPGVEKHSILNIYISKLMAGK 358

Query: 360 VYNMTTTTNGSDRSMVPIGNYEKVMPLDMEPTLLLRDLCAGDSDSAVRLGALELDEEDLA 419
            +  +T+TNGS R+MVP+GNYE+VMPLD+ PT LLR L  GD++ A +LG LELDEEDLA
Sbjct: 359 KFAFSTSTNGSPRAMVPVGNYEEVMPLDVLPTQLLRALIVGDTEVAQKLGCLELDEEDLA 418

Query: 420 LCTFVCPGKYEYGQLLRECLDKIEKEG 446
           LC++VC GKYEYG +LR+ L +IEKEG
Sbjct: 419 LCSYVCAGKYEYGPILRDNLTRIEKEG 445