Pairwise Alignments

Query, 446 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., Na(+)-translocating NADH-quinone reductase subunit A (RefSeq) from Shewanella loihica PV-4

 Score =  588 bits (1517), Expect = e-173
 Identities = 289/447 (64%), Positives = 349/447 (78%), Gaps = 4/447 (0%)

Query: 1   MITIKKGLDLPIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFED 60
           MITIKKGLDLPI G P QVI +G AIK VA LGEEY+G+RPTM ++VGD+V+K Q++FED
Sbjct: 1   MITIKKGLDLPITGGPEQVIHNGPAIKHVATLGEEYIGLRPTMKIKVGDKVQKGQVIFED 60

Query: 61  KKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFEANQLASLNRDAIKT 120
           KKNPGVK+T+  SG + EINRGA+RVLQSVVIEV GDD V+F K++A  L +L    ++ 
Sbjct: 61  KKNPGVKYTALASGTISEINRGAQRVLQSVVIEVEGDDSVSFAKYDAAALDTLEPQLVRD 120

Query: 121 QLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDV 180
            L+ESG+W A RTRPFSK PA+DST   IFVTA+DT PLAA+P V+INE  E F  GL V
Sbjct: 121 NLIESGMWPALRTRPFSKAPAVDSTPAGIFVTAIDTQPLAADPAVIINEHKEDFANGLRV 180

Query: 181 LSALTTGKVYVCKK-GTSLPRSQQPNVEEHVFDGPHPAGLAGTHMHFLYPVSADHVAWSI 239
           L+ LT GKVY+CK  G  +P +   N +   F GPHPAGLAGTH+HF+ P SA    W +
Sbjct: 181 LARLTEGKVYLCKAPGADIPAA---NAQVEEFAGPHPAGLAGTHIHFVLPASAKRTVWHV 237

Query: 240 NYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEVRII 299
            YQDVIA+GQLF TGEL TQRVV++AGP   KPRLVRT  GAS+ +L   E   G+VR+I
Sbjct: 238 GYQDVIAIGQLFTTGELNTQRVVAIAGPKALKPRLVRTHSGASIAELTAGETAQGDVRVI 297

Query: 300 SGSVLSGTKATGPHAYLGRYHLQVSVLREGRDKELFGWAMPGKNKFSVTRSFLGHLFKGQ 359
           +GSVLSG  ATGPHAYLGR+  QVS+L EGR++E  GWAMPG NKFS+TR+FLGHL   +
Sbjct: 298 AGSVLSGKTATGPHAYLGRFFNQVSLLEEGREQEFIGWAMPGANKFSITRAFLGHLSPSR 357

Query: 360 VYNMTTTTNGSDRSMVPIGNYEKVMPLDMEPTLLLRDLCAGDSDSAVRLGALELDEEDLA 419
           ++NMTT+T GSDR+MVPIGNYE+VMPLD+ PT+LLRDL +GD+D A  LGALELDEEDLA
Sbjct: 358 LFNMTTSTGGSDRAMVPIGNYERVMPLDILPTMLLRDLVSGDTDGAAALGALELDEEDLA 417

Query: 420 LCTFVCPGKYEYGQLLRECLDKIEKEG 446
           LCTFVCPGKY+Y   LR+CLD I +EG
Sbjct: 418 LCTFVCPGKYDYASYLRDCLDTIVREG 444