Pairwise Alignments

Query, 446 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  581 bits (1497), Expect = e-170
 Identities = 282/447 (63%), Positives = 348/447 (77%), Gaps = 4/447 (0%)

Query: 1   MITIKKGLDLPIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFED 60
           MITIKKGL+LPIAG P QVI +G AIK VA LGEEY+G+RPTM ++VGD+V+K Q++FED
Sbjct: 1   MITIKKGLELPIAGGPEQVIHNGPAIKHVATLGEEYIGLRPTMKIKVGDKVQKGQVIFED 60

Query: 61  KKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAGDDQVTFDKFEANQLASLNRDAIKT 120
           KKNPGVK+T+  SG +++INRGA+RVLQSVVIEV G+D + F K++A  L +L+   ++ 
Sbjct: 61  KKNPGVKYTALASGTILDINRGAQRVLQSVVIEVEGNDSIAFAKYDATALDTLDAQLVRD 120

Query: 121 QLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDV 180
            L+ESGLWTA RTRPFSKVPA+DS++  IFVTA+DT P AA+P VVI E  E F  GL V
Sbjct: 121 NLIESGLWTALRTRPFSKVPAVDSSAAGIFVTAIDTQPHAADPVVVIREHKEDFANGLKV 180

Query: 181 LSALTTGKVYVCKK-GTSLPRSQQPNVEEHVFDGPHPAGLAGTHMHFLYPVSADHVAWSI 239
           L+ LT  KVY+CK  G  +P +   N +   F G HPAGL GTH+HFL P SA    W +
Sbjct: 181 LARLTEDKVYLCKAPGADIPAA---NAQVEEFAGIHPAGLVGTHIHFLLPASAKRTVWHV 237

Query: 240 NYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEVRII 299
            YQDVIA+GQLF TG+L+T+RVV++AGP   KPRLVRTV+GAS+ +L   E + G VR I
Sbjct: 238 GYQDVIAIGQLFTTGQLHTERVVAIAGPKAAKPRLVRTVLGASMTELTAGETLAGNVRFI 297

Query: 300 SGSVLSGTKATGPHAYLGRYHLQVSVLREGRDKELFGWAMPGKNKFSVTRSFLGHLFKGQ 359
           SGSVL+G  A GP  YLGRYH+QVS+L EG +KE  GW +PG NKFS+TR+FLGH    +
Sbjct: 298 SGSVLNGRTAIGPQGYLGRYHMQVSLLEEGTEKEFLGWVLPGANKFSITRAFLGHFSSSR 357

Query: 360 VYNMTTTTNGSDRSMVPIGNYEKVMPLDMEPTLLLRDLCAGDSDSAVRLGALELDEEDLA 419
           ++NMTT+T GSDR+MVPIGNYE+VMPLD+ PT+LLRDL +GD D AV LGALELDEEDLA
Sbjct: 358 LFNMTTSTGGSDRAMVPIGNYERVMPLDILPTMLLRDLISGDFDGAVTLGALELDEEDLA 417

Query: 420 LCTFVCPGKYEYGQLLRECLDKIEKEG 446
           LCTFVCPGKY+YG  LR+CLD I +EG
Sbjct: 418 LCTFVCPGKYDYGSYLRDCLDTIVREG 444