Pairwise Alignments

Query, 446 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., Na(+)-translocating NADH-quinone reductase subunit A (RefSeq) from Shewanella sp. ANA-3

 Score =  504 bits (1297), Expect = e-147
 Identities = 266/451 (58%), Positives = 323/451 (71%), Gaps = 7/451 (1%)

Query: 1   MITIKKGLDLPIAGTPSQVISDGKAIKKVALLGEEYVGMRPTMHVRVGDEVKKAQILFED 60
           +ITIKKGLDLPI+G P Q+I  G    +VALLGEEYVG++PTM V VGD+VKK Q LFED
Sbjct: 8   VITIKKGLDLPISGEPRQIIEPGNRPSQVALLGEEYVGLKPTMLVEVGDKVKKGQPLFED 67

Query: 61  KKNPGVKFTSPVSGKVVEINRGAKRVLQSVVIEVAG---DDQVTFDKFEANQLASLNRDA 117
           KK  GV FT+P SG++V I+RG +RVLQSVVI   G   D+Q+ FD      L +L+ D 
Sbjct: 68  KKTKGVLFTAPASGEIVAIHRGERRVLQSVVIRCNGLDADEQIRFDIH--TDLQALSADV 125

Query: 118 IKTQLVESGLWTAFRTRPFSKVPAIDSTSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAG 177
           +K QLV+SGLWTA RTRPFS+VPA+DS    IFVTAMDTNPLAA+P ++I EQ +AF AG
Sbjct: 126 VKAQLVKSGLWTALRTRPFSRVPALDSKPAGIFVTAMDTNPLAADPRLIIAEQRDAFKAG 185

Query: 178 LDVLSALTTGKVYVCK-KGTSLPRSQQPNVEEHVFDGPHPAGLAGTHMHFLYPVSADHVA 236
           L VLS LT GKVY+C+ KG +L  +  P VE   F G HPAGLAGTH+HF  PVS +   
Sbjct: 186 LAVLSHLTEGKVYLCQDKGEALVGADLPKVEVRRFTGVHPAGLAGTHIHFTLPVSIERQV 245

Query: 237 WSINYQDVIAVGQLFLTGELYTQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIMPGEV 296
           W I YQDVIA G+LF TGELYT RVV+L GP V  PRL+RT +GA L  LV  E+ PG  
Sbjct: 246 WHIGYQDVIAYGKLFQTGELYTDRVVALGGPSVLNPRLLRTQLGAELSALVADEVKPGNN 305

Query: 297 RIISGSVLSGTKATGPHAYLGRYHLQVSVLREGRDKELFGWAMPGKNKFSVTRSFLGHLF 356
           R++SGSVLSG  A G H +LGR+H QVSVL E    ++  W   G +KFS+TR+    LF
Sbjct: 306 RVVSGSVLSGHTARGVHDFLGRFHNQVSVLAEDVQHQVLPWVRGGSDKFSITRAVTSRLF 365

Query: 357 -KGQVYNMTTTTNGSDRSMVPIGNYEKVMPLDMEPTLLLRDLCAGDSDSAVRLGALELDE 415
              + +  TT   GS R+M+  G  ++VMPLD+ PTLL+RDL   D+D A  LGALELDE
Sbjct: 366 GLTKSFEFTTHQGGSHRAMMAFGQLDRVMPLDILPTLLVRDLVVRDTDEAQALGALELDE 425

Query: 416 EDLALCTFVCPGKYEYGQLLRECLDKIEKEG 446
           EDLALCTFVCPGKY++G+ LR CLD IE+EG
Sbjct: 426 EDLALCTFVCPGKYDFGKELRACLDVIEREG 456