Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., electron transport complex, RnfABCDGE type, D subunit from Pseudomonas stutzeri RCH2

 Score =  118 bits (295), Expect = 3e-31
 Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 21/266 (7%)

Query: 161 VTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQI 220
           VT++L AL +PP  P W   +     VV  K+++GG G+N  NPA+ G   +  ++P ++
Sbjct: 80  VTAVLLALALPPYSPWWLTLIATGCAVVFGKQLYGGLGQNPFNPAMIGYVVVLISFPVEM 139

Query: 221 SGDLVWTAADGYSGATALSQ----------WAQGGAGALINNATGQTI--TWMDAFIGNI 268
           +    W        +  L            W Q  A  ++      TI   W +   G+ 
Sbjct: 140 T---TWPVPHSVGLSAGLQHILGIASLPDGWTQATALDVLKVNKSLTIGELWSNPAFGHF 196

Query: 269 PGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILLSTLF-NVIGSDTNAMFNMPW 327
            G   EV  LA + G  F+++  + SW    G++  ++L+S +F N  GSD+N     P 
Sbjct: 197 GGIGSEVVNLAFLAGGLFLLHKRLFSWHAPVGMLGALLLMSLVFWNGSGSDSN---GSPL 253

Query: 328 HWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIGVMCVLIRVVNPAYPEGMMLAIL 387
            +HL+ G    G FF+ TDPVS++ +  G+  +G  +G++  +IR     YP+G+   +L
Sbjct: 254 -FHLLSGATMLGAFFIVTDPVSSATSPRGRLIFGAGVGILVYVIRAWG-GYPDGVAFGVL 311

Query: 388 FANLFAPLFDHVVVERNIKRRLARYG 413
             NL AP  D+    R    R A  G
Sbjct: 312 LMNLAAPTIDYYTRPRTYGHRKAERG 337