Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Na(+)-translocating NADH-quinone reductase subunit B (RefSeq) from Shewanella amazonensis SB2B

 Score =  345 bits (884), Expect = 2e-99
 Identities = 183/408 (44%), Positives = 246/408 (60%), Gaps = 25/408 (6%)

Query: 13  HFEPGGKHEKWFALYEAAATLFYTPGLVTKRSSHVRDSVDLKRIMIMVWLAVFPAMFWGM 72
           ++ PG   + +F       +LF   G  T+   HVRD++++KR M +V L + PA+ +G+
Sbjct: 14  YYAPGHTMKDFFR------SLFIGHGASTQDRVHVRDAIEVKRTMTLVGLCLLPAILFGI 67

Query: 73  YNAGGQAIAALNHLYSGDQLAAIVAGNWHYWLTEMLGGTMSSDAGWGSKMLLGATYFLPI 132
           YN G QA  A+          +    NWH      + G ++   G    M  G  Y+LPI
Sbjct: 68  YNTGLQAQIAI-------LAGSAPLDNWHQGFYSAIFGGLTESTGIFGLMAYGLIYYLPI 120

Query: 133 YATVFIVGGFWEVLFCMVRKHEVNEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKE 192
           Y    +   FWE++F   R+ E+ EGFFVT++LF+L +P  + LW   +GI+FGVVVAKE
Sbjct: 121 YLAALVTTMFWEMVFARARRQEMQEGFFVTALLFSLCLPANISLWLVVMGISFGVVVAKE 180

Query: 193 VFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGYSGATALSQ-------WAQGG 245
           +FGG G NFLNPALAG AF++FAYP++++      A DGYS AT L+Q       +A+  
Sbjct: 181 LFGGMGYNFLNPALAGLAFIYFAYPSEVTTSAQLVAVDGYSSATTLAQVAANKMKFAEYP 240

Query: 246 AGALINNATGQTITWMDAFIGNIPGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGM 305
                N+A      W DAF+G   G+IGE S LA+  G   ++   +A WRI+ GV++G 
Sbjct: 241 WYHAFNDAA-----WWDAFLGFEVGAIGETSALAIFAGGLLLILTRLADWRIVVGVLVGA 295

Query: 306 ILLSTLFNVIGSDTNAMFNMPWHWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIG 365
           I  S LFNV G   NAM  MPW WHLV GGFA GM FMATDPV+ ++T  GK  +GIL+G
Sbjct: 296 IATSLLFNVFGDGKNAMAAMPWTWHLVTGGFALGMMFMATDPVTTAYTRPGKLMFGILVG 355

Query: 366 VMCVLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVERNIKRRLARYG 413
            M +LIRV N   PEG+MLAILFANL+AP+ D +V   NIKRRL R G
Sbjct: 356 AMTILIRVANVKQPEGIMLAILFANLWAPVLDSLVARFNIKRRLKRNG 403