Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  108 bits (271), Expect = 2e-28
 Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 40/278 (14%)

Query: 155 VNEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFF 214
           +++   +T++L  + +PP  P +   +G  F +V+ K+++GG G+N  NPA+A    L  
Sbjct: 74  MDQSAVLTALLIGVAIPPLAPWYLVVIGTVFAIVMVKQLYGGLGQNLFNPAMAAYVLLLV 133

Query: 215 AYPAQISGDLVWTAAD-------GYSGATALSQWAQGGAGALINNATGQTITWMDAFIGN 267
           ++P  ++    W A         G   A  +   AQG A   +        T +D    +
Sbjct: 134 SFPVLMT---TWAAPSTLAQSSAGILDAIDVIFSAQGAADFALGIDGVSMATPLDTLKTD 190

Query: 268 IP----------------GSIGEV---STLALMIGAAFIVYMGIASWRIIGGVMIGMILL 308
           +                 GS GE      LA + G  F++      W I GG +IG + +
Sbjct: 191 LSMGLTADESLKRAIFGGGSTGEGWFWVNLAYLCGGLFLLATKTIRWHISGG-LIGALFV 249

Query: 309 STLFNVIGS-DTNA--MFNMPWHWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIG 365
            +LF    S DT+A  +FN      L  G      FF+ATDPV+A+ +  G+  +G +IG
Sbjct: 250 CSLFGFGASPDTHASPLFN------LFSGATMLAAFFIATDPVTAATSPRGRLLFGAMIG 303

Query: 366 VMCVLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVER 403
           V+  LIR     YP+G+  A+L ANL APL D+ +  R
Sbjct: 304 VLIYLIRTFG-GYPDGVAFAVLLANLCAPLIDYYIKPR 340