Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Na(+)-translocating NADH-quinone reductase subunit B (RefSeq) from Shewanella loihica PV-4

 Score =  369 bits (948), Expect = e-107
 Identities = 192/383 (50%), Positives = 251/383 (65%), Gaps = 11/383 (2%)

Query: 32  TLFYTPGLVTKRSSHVRDSVDLKRIMIMVWLAVFPAMFWGMYNAGGQAIAALNHLYSGDQ 91
           +L Y  G  TK   HVRD++D+KR M +V L + PA+ +G+YN G QA  AL    +   
Sbjct: 27  SLLYAHGRSTKGKVHVRDAIDVKRTMTLVGLCLLPAILFGIYNLGLQAQLALASGLTTPD 86

Query: 92  LAAIVAGNWHYWLTEMLGGTMSSDAGWGSKMLLGATYFLPIYATVFIVGGFWEVLFCMVR 151
           +       W       + G +   +G+      G +++LPIY T  +V  FWE++F  VR
Sbjct: 87  V-------WQLLPFNAITGGLGEQSGFFGLFGYGLSFYLPIYLTALLVSLFWEMVFAKVR 139

Query: 152 KHEVNEGFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALAGRAF 211
           + E++EGFFVT++LF LI+P + PLW  ALGITFGV++AKEVFGG G NFLNPALAG AF
Sbjct: 140 RQELHEGFFVTALLFTLILPVSTPLWIVALGITFGVIMAKEVFGGMGYNFLNPALAGYAF 199

Query: 212 LFFAYPAQISGDLVWTAADGYSGATALSQWAQGGA---GALINNATGQTITWMDAFIGNI 268
           ++FAYP +++    + A DG+SGAT L Q A G     G     A    + W DAF G  
Sbjct: 200 IYFAYPTEVAQIAQFVAVDGFSGATTLIQTAAGKMSFEGYTWYQAFSDPL-WWDAFFGFT 258

Query: 269 PGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILLSTLFNVIGSDTNAMFNMPWH 328
            GSI E STLA++IG   ++   +A WR++ GVM GM+  + LFN+IGS  N MF MPW 
Sbjct: 259 VGSIAETSTLAILIGGLLLLLTRLADWRVVAGVMAGMVATAVLFNLIGSAKNEMFAMPWT 318

Query: 329 WHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIGVMCVLIRVVNPAYPEGMMLAILF 388
           WHLV GGFA GM FMATDPV+ ++T  GK+AYG+LIG M VLIRV+N   PEG+MLAILF
Sbjct: 319 WHLVTGGFALGMMFMATDPVTTAYTRQGKFAYGVLIGFMTVLIRVLNLKMPEGIMLAILF 378

Query: 389 ANLFAPLFDHVVVERNIKRRLAR 411
           ANL+APLFD++V   N+KRRL R
Sbjct: 379 ANLWAPLFDYLVARSNMKRRLKR 401