Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., electron transport complex protein RnfD, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  115 bits (288), Expect = 2e-30
 Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 15/252 (5%)

Query: 149 MVRKHEVNE-GFFVTSILFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGRNFLNPALA 207
           M R+ EV++    V+S+LFA ++P   P W   +G+T  + + K  FGG G N +N AL 
Sbjct: 73  MGREPEVDDLTAVVSSLLFAFLLPANAPWWLVIVGVTLAISLGKMAFGGLGTNPINTALV 132

Query: 208 GRAFLFFAYPAQISGDLVWTAADGYSGATALSQWAQGGAGALINNATGQTITWMDAFIGN 267
           G A L  ++P  +  + +            L  +   GA A+        I+  D  +GN
Sbjct: 133 GWAMLHVSWPVLMDPNAMQLDTMLIDPLVRLKFF---GAAAV------HDISLTDLIMGN 183

Query: 268 IPGSIGEVSTLALMIGAAFIVYMGIASWRIIGGVMIGMILLSTLFNVIGSDTNAMFNMPW 327
             G +G   T AL +G +++   G   W I     +G++ ++ +FN++  D   ++  P 
Sbjct: 184 QIGGLGAAQTGALFLGGSYLAARGTIRWEISLSFFVGVVAVAAIFNILNPD---LYATP- 239

Query: 328 HWHLVLGGFAFGMFFMATDPVSASFTNSGKWAYGILIGVMCVLIRVVNPAYPEGMMLAIL 387
            +HL+ G    G FF+AT+  S+         YG++ G + ++IRV    YP+G+  A++
Sbjct: 240 VFHLLTGSTLLGGFFLATEGASSPGRQIPMMLYGLIGGALVIIIRVYG-IYPDGVPFAVM 298

Query: 388 FANLFAPLFDHV 399
             NL APL D +
Sbjct: 299 LINLLAPLLDSI 310