Pairwise Alignments

Query, 415 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., Na(+)-translocating NADH-quinone reductase subunit B (RefSeq) from Shewanella sp. ANA-3

 Score =  549 bits (1414), Expect = e-161
 Identities = 275/411 (66%), Positives = 311/411 (75%), Gaps = 13/411 (3%)

Query: 1   MGLKKFLEDIEHHFEPGGKHEKWFALYEAAATLFYTPGLVTKRSSHVRDSVDLKRIMIMV 60
           M LK F E IE  FE GGK+EK++AL+EAA T+FYTPG V K  +HVRD++DLKR+MI V
Sbjct: 1   MSLKDFFERIEPDFEKGGKYEKFYALFEAAYTIFYTPGKVNKGKTHVRDNIDLKRMMITV 60

Query: 61  WLAVFPAMFWGMYNAGGQAIAALNHLYSGDQLAAIVAGNWHYWLTEMLGGTMSSDAGWGS 120
           W   FPAMF GMYN G QA  AL   ++   +       W   L  M G  +++++GW +
Sbjct: 61  WACAFPAMFVGMYNVGLQAQLALIAGFATPDV-------WQVSLFGMFGTELTANSGWPA 113

Query: 121 KMLLGATYFLPIYATVFIVGGFWEVLFCMVRKHEVNEGFFVTSILFALIVPPTLPLWQAA 180
            M  GA +FLPIYA  F VGG WEVLF  +R HEVNEGFFVTSILFAL +P T+PLW  A
Sbjct: 114 LMWYGACFFLPIYAVTFAVGGIWEVLFAAIRGHEVNEGFFVTSILFALTLPATIPLWMVA 173

Query: 181 LGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGYSGATALSQ 240
           LGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYP  +SGD  W  ADGYSGATALSQ
Sbjct: 174 LGITFGVVVAKEVFGGTGRNFLNPALAGRAFLFFAYPLNMSGDTSWVVADGYSGATALSQ 233

Query: 241 WAQGGAGALINNATGQTITWMDAFIGNIPGSIGEVSTLALMIGAAFIVYMGIASWRIIGG 300
            A G      N        W DAF G IPGS+GEVSTLA+++G   I+Y  IASWRI+GG
Sbjct: 234 AAAGTLDYTFNQ------NWWDAFFGFIPGSVGEVSTLAILLGGLVIIYTRIASWRIVGG 287

Query: 301 VMIGMILLSTLFNVIGSDTNAMFNMPWHWHLVLGGFAFGMFFMATDPVSASFTNSGKWAY 360
           VM+GMI +STL NVIGSDTN MF MPW+WHLVLGGFAFGM FMATDPVSASFTN  KWAY
Sbjct: 288 VMVGMIAISTLLNVIGSDTNPMFAMPWYWHLVLGGFAFGMMFMATDPVSASFTNQAKWAY 347

Query: 361 GILIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDHVVVERNIKRRLAR 411
           GILIG M V IRV+NPA+PEGMMLAILFANLFAPLFDH VV+ NIKRR+AR
Sbjct: 348 GILIGAMAVFIRVINPAFPEGMMLAILFANLFAPLFDHFVVQANIKRRIAR 398