Pairwise Alignments

Query, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit from Pseudomonas stutzeri RCH2

 Score =  246 bits (627), Expect = 4e-70
 Identities = 135/262 (51%), Positives = 174/262 (66%), Gaps = 8/262 (3%)

Query: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAGIEAKG- 59
           M+S  +S  +TL V + + LVCSI V+ AAV LR  Q+EN  LDKQ  IL +AG+   G 
Sbjct: 1   MSSQKESTVRTLTVALLVCLVCSIFVAGAAVALRPTQQENRLLDKQRSILAIAGLGEAGM 60

Query: 60  -SKQIVELFNKSIEPRLVDFNTGDFV-EGDAANYDQRKAAKEASESIKLTAEQDKAKIQR 117
              Q+ +LFN+ I  RLVD  TG F  E DA  +D   AAK+   S +L  EQD A I+R
Sbjct: 61  SGNQVKQLFNERIVARLVDLETGKFSDEFDAKTFDPLAAAKDPQLSKRLPGEQDIASIKR 120

Query: 118 RANVGVVYLVK-DGD-KTSKVILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYEQGETPG 175
           R     VY+V+  G+ +   +ILPV G GLWS +Y F+AV+ D +TV+G  +Y+ GETPG
Sbjct: 121 RERYSTVYIVEGQGEGEIDTLILPVRGYGLWSTLYGFMAVQGDLDTVAGFGFYQHGETPG 180

Query: 176 LGGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGA-PQG--SEHGVDGLSGATLTSNGVQ 232
           LGGEV+NP WR QW GK+LFD+N K A++IVKGG  PQ   + H VDGL+GATLTSNGV 
Sbjct: 181 LGGEVDNPKWRGQWPGKELFDDNGKLAVQIVKGGVDPQSPRATHQVDGLAGATLTSNGVN 240

Query: 233 NTFDFWLGDMGFGPFLTKVRDG 254
           +   FWLG+ GFGPF+  +R G
Sbjct: 241 SLLQFWLGENGFGPFIANLRAG 262