Pairwise Alignments

Query, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (428), Expect = 5e-47
 Identities = 97/260 (37%), Positives = 145/260 (55%), Gaps = 10/260 (3%)

Query: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAGIEA--K 58
           MA N DS+  T+   + L LVCS +++  A    D  KE   + K+++++Q   I A  K
Sbjct: 1   MAFNKDSVLGTMTFTVVLCLVCSFMITGTA----DVLKERKLVKKRNELMQNVLIAADIK 56

Query: 59  GSKQIVELFNKSIEPRLVDFNTGDFVEGD-AANYDQRKAAKEASESIKLTAEQDKAKIQR 117
               +   F   + P +V+  TG+  E D   +YD+R AA     S K+   +D A+I+ 
Sbjct: 57  DVSDVKATFEARVRPVMVNLATGELHERDNILDYDERMAAINPETSSKIA--KDTARIKT 114

Query: 118 RAN-VGVVYLVKDGDKTSKVILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYEQGETPGL 176
           RAN + +  ++ D  +   ++LPV+G GLWS++Y FV V+ D NT++G  +YE GETPG+
Sbjct: 115 RANEIRIFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTITGAVFYEHGETPGI 174

Query: 177 GGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNGVQNTFD 236
           G  + +  W A+W GK++F+     A KIVKG A  G    VDG+SGAT T  GV     
Sbjct: 175 GDFINHDDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAVQ 234

Query: 237 FWLGDMGFGPFLTKVRDGGL 256
           FW G  GF   L K++  G+
Sbjct: 235 FWFGPEGFEAALGKLKAAGV 254