Pairwise Alignments

Query, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella amazonensis SB2B

 Score =  254 bits (650), Expect = 1e-72
 Identities = 143/267 (53%), Positives = 176/267 (65%), Gaps = 12/267 (4%)

Query: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAG-IEAKG 59
           MA N DS  +TLF+V+ L LVCSI VS AAV LR  Q+EN  LDKQ  IL+ A  ++ K 
Sbjct: 1   MAKNKDSFGRTLFIVVGLCLVCSIFVSTAAVLLRPTQQENKLLDKQKYILEAANLVDTKA 60

Query: 60  SK----QIVELFNKSIEPRLVDFNTGDFVEG-DAANYDQRKAAKEASESIKLTAEQDKAK 114
           +      I+  +NK +E R+V+  TG+FVEG D   +DQ KAA++   S K   E D A 
Sbjct: 61  ANVTKADILATYNKYVEARVVNLKTGEFVEGVDGNTFDQEKAARDPKTSSK--PEHDIAS 118

Query: 115 IQRRANVGVVYLVKDGDKTSK-VILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYE---Q 170
           I+R  +  VVYLV+D     K VILPV G GLWS M+AF+A+E D NT+ GL YY+    
Sbjct: 119 IKRVPDQAVVYLVRDDAGALKTVILPVKGYGLWSTMFAFLALEPDLNTIQGLVYYDFTGS 178

Query: 171 GETPGLGGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNG 230
           GETPGLGGEV+NP W+A W GKKLFDE  K AI + K  A   S HGVD LSGATLTSNG
Sbjct: 179 GETPGLGGEVQNPKWKALWHGKKLFDEQGKLAISVTKNPAVAASVHGVDALSGATLTSNG 238

Query: 231 VQNTFDFWLGDMGFGPFLTKVRDGGLN 257
           VQ++  FWLG  GF  F+ K R+GGL+
Sbjct: 239 VQHSLTFWLGKEGFASFIEKARNGGLS 265