Pairwise Alignments

Query, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella loihica PV-4

 Score =  264 bits (674), Expect = 2e-75
 Identities = 144/266 (54%), Positives = 182/266 (68%), Gaps = 11/266 (4%)

Query: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAG-IEAKG 59
           MASN DS  +TLFVV+ L  +CS+ VS AAV L+  Q+EN  LDKQ  IL+ AG ++ K 
Sbjct: 1   MASNKDSFGRTLFVVVGLCFICSVFVSTAAVLLKPTQQENKLLDKQKYILEAAGLVDTKS 60

Query: 60  SK----QIVELFNKSIEPRLVDFNTGDFVEGDAANYDQRKAAKEASESIKLTAEQDKAKI 115
            +    +I+E ++K +E +LVD  +GD+VEG+A  +D  KAA+    S K   E D A +
Sbjct: 61  GEVSKAKILETYDKYVEAKLVDLKSGDWVEGNADTFDTEKAARTLETSFK--PEHDIASV 118

Query: 116 QRRANVGVVYLVKDGDKTSK-VILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYE---QG 171
           +R AN GVVYLV+D   T + VI+PV G GLWS MYAF+AVE+D NTV  L YY+    G
Sbjct: 119 KRVANKGVVYLVRDDAGTLQTVIIPVKGYGLWSTMYAFLAVESDLNTVRSLVYYDFTGSG 178

Query: 172 ETPGLGGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNGV 231
           ETPGLGGEV+NP W A+W GKKL+D+    AIK+ K  A   S HGVD LSGATLTSNGV
Sbjct: 179 ETPGLGGEVQNPKWIAKWKGKKLYDDQGNLAIKVTKNPAVAESVHGVDALSGATLTSNGV 238

Query: 232 QNTFDFWLGDMGFGPFLTKVRDGGLN 257
           Q++ DFWLG  GF  FL K R+GGL+
Sbjct: 239 QHSLDFWLGKEGFARFLEKARNGGLS 264