Pairwise Alignments

Query, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., Na(+)-translocating NADH-quinone reductase subunit C (RefSeq) from Shewanella loihica PV-4

 Score =  176 bits (445), Expect = 6e-49
 Identities = 93/254 (36%), Positives = 149/254 (58%), Gaps = 4/254 (1%)

Query: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAGIEAKGS 60
           MA   D++  T+   + L L CS +++  A  L++++      + +  +L  A I+  G 
Sbjct: 1   MAFKKDTVVGTMIFTLVLCLSCSFMITGTAEVLKERKLVKKRDELKRNVLLAADIDISGD 60

Query: 61  KQIVELFNKSIEPRLVDFNTGDF-VEGDAANYDQRKAAKEASESIKLTAEQDKAKIQRRA 119
           K    +F +S++P LV+ ++G    + +  ++D R AA     S K   ++D AKI+ RA
Sbjct: 61  KDFRTIFEQSVKPLLVELDSGVIDSQENVLDFDDRMAAINPQTSSK--PKKDIAKIKTRA 118

Query: 120 NVGVVYLV-KDGDKTSKVILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYEQGETPGLGG 178
           N   V+ V  D  +   V+LP++G GLWS++Y +VA++ D NT+  + +YE GETPG+G 
Sbjct: 119 NQARVFKVFDDKGELHAVVLPIYGKGLWSIIYGYVALKPDLNTIENVVFYEHGETPGIGD 178

Query: 179 EVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNGVQNTFDFW 238
            +++ AW  +  GK+LFDE  + + K+VKGGA  G  HGVD +SGAT+T  GVQ    FW
Sbjct: 179 FLDDKAWTDKLKGKQLFDEKGQVSFKVVKGGAKAGDLHGVDAVSGATMTGRGVQRAMQFW 238

Query: 239 LGDMGFGPFLTKVR 252
            G  G+  FL K++
Sbjct: 239 FGVEGYQTFLHKLK 252