Pairwise Alignments

Query, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., Na+-translocating NADH-quinone reductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 95.5 bits (236), Expect = 8e-25
 Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 36/256 (14%)

Query: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAGI----- 55
           M  N +S   T+     + ++ + +++  +  L+  Q +N  LD + +IL    I     
Sbjct: 1   MKMNTNSNSYTIIYASVMVVIVAFLLAFVSSSLKATQDKNVQLDTKKQILAALNIKNVED 60

Query: 56  -EAKGSKQIVELFNKSIEPRLVDFNTGDFVEGDAANYDQRKAAKEASESIKLTAEQDKAK 114
            +A+  K +      +++  L + NTG+F    A NY+     KE  E  +L        
Sbjct: 61  ADAEYQKYVKGDMLMNVDGTLTE-NTGEF----ATNYE-----KEVKEHQRLHV------ 104

Query: 115 IQRRANVGVVYLVKDGDKTSKVILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYEQGETP 174
                       V D D  +K ++PV+G GLW  ++ +VA+  D +TV G+ +    ETP
Sbjct: 105 -----------FVCDVDGQTKYVVPVYGAGLWGGIWGYVALNEDKDTVYGVYFSHASETP 153

Query: 175 GLGGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNGVQNT 234
           GLG E+    ++ ++ GKK   EN   A+ +VK G  + +++ VDG+SG T+TS GV   
Sbjct: 154 GLGAEIATDWFQHEFAGKKTL-ENGAVALGVVKNGKVEKADYQVDGISGGTITSVGVDAM 212

Query: 235 FDFWLGDMGFGPFLTK 250
               L +  +  FLTK
Sbjct: 213 LKACLNN--YISFLTK 226