Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., Electron transport complex protein RnfE from Pseudomonas fluorescens FW300-N2E2

 Score = 54.7 bits (130), Expect = 9e-13
 Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 24/166 (14%)

Query: 32  LAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHIPNSVRIIVQMAIIASLVIVVDQILK 91
           +  +  L  A  + LA   V       + L+R H+    R++  + + A+L   +  +L+
Sbjct: 2   VGASDSLVGALGLWLAWALVLCSHGLAMGLVRQHLAACQRLLASIVLAATLSTCIGLVLQ 61

Query: 92  AYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKSEPIPSFIDGIGNGLGYGFVLMTVGFF 151
           A+  ++ + LS++VG +  +C+ +     F     P    + G+     +G +++++G  
Sbjct: 62  AWALELYRPLSLYVGWVALSCVALEHEGFFVDSRWPGRLRLAGL-----FGLLMISLGAV 116

Query: 152 RELLGSGKLFGLEVLPLISNGGWYQPNGLMLLAPSAFFLIGFMIWA 197
           REL+G+G       LP            L LLAP  F L+G ++ A
Sbjct: 117 RELIGNG-------LP------------LALLAPGGFILLGLLLAA 143