Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella amazonensis SB2B

 Score =  321 bits (823), Expect = 5e-93
 Identities = 158/206 (76%), Positives = 185/206 (89%)

Query: 4   AKELKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIR 63
           A ELKK +  P+++NNPIALQ+LGVCSALAVT+KLETA VMTLA+  VTA SN F+S+IR
Sbjct: 2   ANELKKVLTGPIINNNPIALQILGVCSALAVTSKLETALVMTLALTAVTAFSNLFISMIR 61

Query: 64  NHIPNSVRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAM 123
           NHIP+SVRIIVQMAIIASLVIVVDQIL+AY YD++KQLSVFVGLIITNCIVMGRAEA+AM
Sbjct: 62  NHIPSSVRIIVQMAIIASLVIVVDQILQAYAYDVAKQLSVFVGLIITNCIVMGRAEAYAM 121

Query: 124 KSEPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPLISNGGWYQPNGLMLL 183
           K+ P+ SF+DGIGNGLGYG +L++VGF REL G+G LFG+E+L  IS+GGWYQPNGL+LL
Sbjct: 122 KTPPMMSFMDGIGNGLGYGAILLSVGFVRELFGNGSLFGVEILSKISDGGWYQPNGLLLL 181

Query: 184 APSAFFLIGFMIWAIRTFKPEQVEAK 209
            PSAFFLIG +IW IRT+KPEQVEAK
Sbjct: 182 PPSAFFLIGVLIWIIRTYKPEQVEAK 207