Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

 Score =  241 bits (614), Expect = 9e-69
 Identities = 119/203 (58%), Positives = 150/203 (73%), Gaps = 1/203 (0%)

Query: 1   MSSAKELKKSVLA-PVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFV 59
           MS +    + +L  P+  NNP+A+QVLGVCSALAV+  ++TA VMTLAV FV   SN  +
Sbjct: 1   MSKSMTATRDILTGPIFANNPVAMQVLGVCSALAVSNSMQTALVMTLAVTFVLVFSNLII 60

Query: 60  SLIRNHIPNSVRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAE 119
           S IRN IPNSVRII QM +IASLVI+VD +L+   Y++S+QLSVFVGLIITNCI+MGRAE
Sbjct: 61  SSIRNFIPNSVRIIAQMTVIASLVIIVDMVLQDVAYELSRQLSVFVGLIITNCIIMGRAE 120

Query: 120 AFAMKSEPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPLISNGGWYQPNG 179
           AFAMK  P  + +D +GN +GYG +L++V F RELLG+G LFG E+L  + N GWY  N 
Sbjct: 121 AFAMKMPPHLAVVDAMGNAMGYGVILLSVAFVRELLGAGTLFGHEILKTVENDGWYLANE 180

Query: 180 LMLLAPSAFFLIGFMIWAIRTFK 202
           +  L PSAFFLIG +IWAI   +
Sbjct: 181 MFKLPPSAFFLIGLLIWAINVIQ 203