Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella loihica PV-4

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 17/159 (10%)

Query: 11  VLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHI--PN 68
           V A  +DN  ++   +G+C+ LAV+ K+ T+F + +AV+ V  L+     LI + +  P 
Sbjct: 9   VQAVFIDNMALSF-FMGMCTFLAVSKKVSTSFGLGIAVIVVMTLAVPLNQLIYSKVLAPG 67

Query: 69  SV-------------RIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVM 115
           ++             ++I  + +IA+LV +++  L  Y+  +   L +F+ L+  NC + 
Sbjct: 68  ALAWAGYPELDLSYLKLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLLTVNCAIF 127

Query: 116 GRAEAFAMKSEPI-PSFIDGIGNGLGYGFVLMTVGFFRE 153
                 A +   +  S +   G+GLG+   ++ +   RE
Sbjct: 128 AGVIFMANRDYTLGESVVFATGSGLGWAMAIVLLAGLRE 166